Protein : Qrob_P0082180.2 Q. robur
Protein Identifier  ? Qrob_P0082180.2 Organism . Name  Quercus robur
Score  17.3 Score Type  egn
Protein Description  (M=49) PTHR24420//PTHR24420:SF583 - LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE // SUBFAMILY NOT NAMED Code Enzyme  EC:2.7.11.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 598  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0048544 recognition of pollen The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0518s00220g 1 597 + 597 Gaps:7 78.18 779 60.92 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_001389 1 597 + 597 Gaps:5 77.86 777 60.83 0.0 Receptor-like protein kinase 1
blastp_kegg lcl|pop:POPTR_0005s05830g 1 597 + 597 Gaps:4 78.09 776 60.56 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0576180 1 597 + 597 Gaps:6 77.27 783 60.83 0.0 ATP binding protein putative (EC:2.7.11.25)
blastp_kegg lcl|tcc:TCM_001388 1 597 + 597 Gaps:5 76.96 777 60.87 0.0 Receptor-like protein kinase 1
blastp_kegg lcl|rcu:RCOM_0576160 1 597 + 597 Gaps:6 73.81 817 61.36 0.0 ATP binding protein putative (EC:2.7.11.25)
blastp_kegg lcl|vvi:100265971 17 597 + 581 Gaps:5 75.71 774 61.77 0.0 G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like
blastp_kegg lcl|cic:CICLE_v10027040mg 1 597 + 597 Gaps:15 77.21 781 59.20 0.0 hypothetical protein
blastp_kegg lcl|cit:102627774 1 597 + 597 Gaps:15 77.21 781 59.20 0.0 G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like
blastp_kegg lcl|vvi:100267699 17 597 + 581 Gaps:9 75.52 768 63.62 0.0 G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like
blastp_uniprot_sprot sp|Q9FLV4|Y5248_ARATH 1 597 + 597 Gaps:80 72.02 872 31.85 2e-42 G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS Arabidopsis thaliana GN At5g24080 PE 2 SV 1
blastp_uniprot_sprot sp|Q39202|RLK1_ARATH 36 591 + 556 Gaps:60 72.72 832 29.92 1e-40 G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS Arabidopsis thaliana GN RLK1 PE 2 SV 2
blastp_uniprot_sprot sp|P17801|KPRO_MAIZE 4 519 + 516 Gaps:91 67.44 817 29.04 3e-40 Putative receptor protein kinase ZmPK1 OS Zea mays GN PK1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9ZT07|RKS1_ARATH 39 520 + 482 Gaps:79 61.58 833 28.85 3e-31 G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS Arabidopsis thaliana GN RKS1 PE 3 SV 3
blastp_uniprot_sprot sp|Q39086|SD17_ARATH 30 520 + 491 Gaps:107 61.21 843 28.88 2e-30 Receptor-like serine/threonine-protein kinase SD1-7 OS Arabidopsis thaliana GN SD17 PE 1 SV 1
blastp_uniprot_sprot sp|Q9XID3|Y1343_ARATH 22 593 + 572 Gaps:56 68.03 829 29.96 4e-29 G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS Arabidopsis thaliana GN At1g34300 PE 1 SV 1
blastp_uniprot_sprot sp|O64782|SD129_ARATH 1 567 + 567 Gaps:79 69.32 805 29.93 7e-29 G-type lectin S-receptor-like serine/threonine-protein kinase SD1-29 OS Arabidopsis thaliana GN SD129 PE 1 SV 1
blastp_uniprot_sprot sp|O64477|Y2913_ARATH 5 519 + 515 Gaps:58 62.20 828 27.57 9e-29 G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS Arabidopsis thaliana GN At2g19130 PE 2 SV 1
blastp_uniprot_sprot sp|O81905|SD18_ARATH 30 524 + 495 Gaps:84 61.76 850 27.43 1e-28 Receptor-like serine/threonine-protein kinase SD1-8 OS Arabidopsis thaliana GN SD18 PE 1 SV 1
blastp_uniprot_sprot sp|O64778|Y1142_ARATH 40 567 + 528 Gaps:83 65.06 807 28.38 4e-28 G-type lectin S-receptor-like serine/threonine-protein kinase At1g61420 OS Arabidopsis thaliana GN At1g61420 PE 3 SV 2
rpsblast_cdd gnl|CDD|201803 67 168 + 102 Gaps:9 100.00 109 37.61 1e-22 pfam01453 B_lectin D-mannose binding lectin. These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria.
rpsblast_cdd gnl|CDD|128418 33 141 + 109 Gaps:7 96.49 114 33.64 2e-15 smart00108 B_lectin Bulb-type mannose-specific lectin.
rpsblast_cdd gnl|CDD|28910 33 142 + 110 Gaps:8 96.55 116 32.14 9e-14 cd00028 B_lectin Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes such as cell-cell and host-pathogen interactions serum glycoprotein turnover and innate immune responses..
rpsblast_kog gnl|CDD|36401 473 539 + 67 Gaps:3 18.84 361 42.65 3e-09 KOG1187 KOG1187 KOG1187 Serine/threonine protein kinase [Signal transduction mechanisms].

28 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 69 202 134 SSF51110 none none IPR001480
SUPERFAMILY 462 539 78 SSF56112 none none IPR011009
Phobius 18 426 409 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 275 309 35 PTHR24420:SF583 none none none
SUPERFAMILY 168 257 90 SSF51110 none none IPR001480
Gene3D 493 539 47 G3DSA:3.30.200.20 none none none
Phobius 1 1 1 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 33 145 113 G3DSA:2.90.10.10 none none IPR001480
PANTHER 119 139 21 PTHR24420 none none none
Phobius 427 450 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 146 274 129 G3DSA:2.90.10.10 none none IPR001480
ProSiteProfiles 143 269 127 PS50927 none Bulb-type lectin domain profile. IPR001480
Phobius 13 17 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
SMART 29 142 114 SM00108 none Bulb-type mannose-specific lectin IPR001480
SMART 143 277 135 SM00108 none Bulb-type mannose-specific lectin IPR001480
PANTHER 275 309 35 PTHR24420 none none none
Pfam 68 166 99 PF01453 none D-mannose binding lectin IPR001480
Gene3D 415 492 78 G3DSA:2.60.120.200 none none IPR013320
PANTHER 419 597 179 PTHR24420 none none none
Pfam 243 307 65 PF00954 none S-locus glycoprotein family IPR000858
ProSiteProfiles 23 140 118 PS50927 none Bulb-type lectin domain profile. IPR001480
PANTHER 119 139 21 PTHR24420:SF583 none none none
PANTHER 419 597 179 PTHR24420:SF583 none none none
Phobius 451 597 147 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 2 12 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
ProSiteProfiles 326 407 82 PS50948 none PAN/Apple domain profile. IPR003609
ProSitePatterns 493 516 24 PS00107 none Protein kinases ATP-binding region signature. IPR017441
Phobius 1 17 17 SIGNAL_PEPTIDE none Signal peptide region none

4 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 19 18
SignalP_EUK 1 17 16
SignalP_GRAM_NEGATIVE 1 17 16
TMHMM 427 449 22

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 17   Secretory pathway 1 0.954 0.034 NON-PLANT 17