4 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0020037 | heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. |
GO:0055114 | oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
GO:0004601 | peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. |
GO:0006979 | response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. |
34 Blast
Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
---|---|---|---|---|---|---|---|---|---|---|---|
blastp_kegg | lcl|pop:POPTR_0003s21660g | 1 | 194 | + | 194 | Gaps:7 | 52.15 | 326 | 59.41 | 3e-55 | POPTRDRAFT_817694 peroxidase family protein |
blastp_kegg | lcl|tcc:TCM_040331 | 1 | 194 | + | 194 | Gaps:6 | 51.98 | 329 | 59.06 | 4e-54 | Peroxidase superfamily protein |
blastp_kegg | lcl|vvi:100253646 | 4 | 207 | + | 204 | Gaps:5 | 43.67 | 332 | 62.07 | 1e-51 | peroxidase N-like |
blastp_kegg | lcl|cit:102606736 | 7 | 194 | + | 188 | Gaps:5 | 42.77 | 332 | 63.38 | 2e-51 | peroxidase 59-like |
blastp_kegg | lcl|pper:PRUPE_ppb006944mg | 10 | 207 | + | 198 | Gaps:3 | 42.17 | 332 | 67.14 | 5e-51 | hypothetical protein |
blastp_kegg | lcl|gmx:100787073 | 1 | 146 | + | 146 | Gaps:4 | 45.45 | 330 | 63.33 | 9e-51 | peroxidase N-like |
blastp_kegg | lcl|pvu:PHAVU_003G134600g | 1 | 194 | + | 194 | Gaps:7 | 52.28 | 329 | 59.30 | 2e-50 | hypothetical protein |
blastp_kegg | lcl|pmum:103327656 | 8 | 207 | + | 200 | Gaps:3 | 42.64 | 333 | 65.49 | 2e-50 | peroxidase 59 |
blastp_kegg | lcl|sly:101268131 | 3 | 152 | + | 150 | Gaps:4 | 46.67 | 330 | 57.79 | 2e-50 | peroxidase N-like |
blastp_kegg | lcl|gmx:100817622 | 1 | 133 | + | 133 | Gaps:2 | 40.79 | 331 | 67.41 | 5e-50 | peroxidase N-like |
blastp_pdb | 1qgj_B | 26 | 194 | + | 169 | Gaps:7 | 48.00 | 300 | 58.33 | 5e-46 | mol:protein length:300 PEROXIDASE N |
blastp_pdb | 1qgj_A | 26 | 194 | + | 169 | Gaps:7 | 48.00 | 300 | 58.33 | 5e-46 | mol:protein length:300 PEROXIDASE N |
blastp_pdb | 1sch_B | 26 | 193 | + | 168 | Gaps:8 | 46.26 | 294 | 55.15 | 9e-41 | mol:protein length:294 PEANUT PEROXIDASE MAJOR CATIONIC ISOZYME |
blastp_pdb | 1sch_A | 26 | 193 | + | 168 | Gaps:8 | 46.26 | 294 | 55.15 | 9e-41 | mol:protein length:294 PEANUT PEROXIDASE MAJOR CATIONIC ISOZYME |
blastp_pdb | 1gwo_A | 26 | 194 | + | 169 | Gaps:12 | 54.37 | 309 | 44.64 | 2e-35 | mol:protein length:309 PEROXIDASE C1A |
blastp_pdb | 1gx2_B | 26 | 194 | + | 169 | Gaps:6 | 36.25 | 309 | 58.04 | 2e-35 | mol:protein length:309 PEROXIDASE C1A |
blastp_pdb | 1gx2_A | 26 | 194 | + | 169 | Gaps:6 | 36.25 | 309 | 58.04 | 2e-35 | mol:protein length:309 PEROXIDASE C1A |
blastp_pdb | 3atj_B | 26 | 194 | + | 169 | Gaps:6 | 36.25 | 309 | 58.04 | 2e-35 | mol:protein length:309 PROTEIN (HORSERADISH PEROXIDASE C1A) |
blastp_pdb | 3atj_A | 26 | 194 | + | 169 | Gaps:6 | 36.25 | 309 | 58.04 | 2e-35 | mol:protein length:309 PROTEIN (HORSERADISH PEROXIDASE C1A) |
blastp_pdb | 1gwt_A | 26 | 194 | + | 169 | Gaps:6 | 36.25 | 309 | 58.04 | 2e-35 | mol:protein length:309 PEROXIDASE C1A |
blastp_uniprot_sprot | sp|Q39034|PER59_ARATH | 1 | 194 | + | 194 | Gaps:10 | 52.44 | 328 | 52.91 | 5e-48 | Peroxidase 59 OS Arabidopsis thaliana GN PER59 PE 1 SV 2 |
blastp_uniprot_sprot | sp|Q42517|PERN_ARMRU | 1 | 207 | + | 207 | Gaps:9 | 52.60 | 327 | 53.49 | 3e-47 | Peroxidase N OS Armoracia rusticana GN HRPN PE 2 SV 1 |
blastp_uniprot_sprot | sp|P22195|PER1_ARAHY | 17 | 193 | + | 177 | Gaps:9 | 46.20 | 316 | 54.11 | 2e-41 | Cationic peroxidase 1 OS Arachis hypogaea GN PNC1 PE 1 SV 2 |
blastp_uniprot_sprot | sp|A7NY33|PER4_VITVI | 4 | 194 | + | 191 | Gaps:10 | 49.53 | 321 | 52.83 | 8e-41 | Peroxidase 4 OS Vitis vinifera GN GSVIVT00023967001 PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q9FLC0|PER52_ARATH | 25 | 193 | + | 169 | Gaps:8 | 42.28 | 324 | 56.20 | 2e-39 | Peroxidase 52 OS Arabidopsis thaliana GN PER52 PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q9LVL1|PER68_ARATH | 2 | 207 | + | 206 | Gaps:9 | 49.23 | 325 | 53.75 | 2e-39 | Peroxidase 68 OS Arabidopsis thaliana GN PER68 PE 2 SV 1 |
blastp_uniprot_sprot | sp|P00434|PERP7_BRARR | 26 | 193 | + | 168 | Gaps:8 | 45.95 | 296 | 55.88 | 6e-39 | Peroxidase P7 OS Brassica rapa subsp. rapa PE 1 SV 3 |
blastp_uniprot_sprot | sp|Q02200|PERX_NICSY | 3 | 192 | + | 190 | Gaps:7 | 60.56 | 322 | 41.54 | 1e-38 | Lignin-forming anionic peroxidase OS Nicotiana sylvestris PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q9FG34|PER54_ARATH | 7 | 194 | + | 188 | Gaps:13 | 51.12 | 358 | 44.81 | 1e-38 | Peroxidase 54 OS Arabidopsis thaliana GN PER54 PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q9SD46|PER36_ARATH | 27 | 194 | + | 168 | Gaps:8 | 37.79 | 344 | 55.38 | 4e-38 | Peroxidase 36 OS Arabidopsis thaliana GN PER36 PE 2 SV 2 |
21 Domain Motifs
Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
---|---|---|---|---|---|---|---|
Phobius | 1 | 10 | 10 | SIGNAL_PEPTIDE_N_REGION | none | N-terminal region of a signal peptide. | none |
Phobius | 22 | 25 | 4 | SIGNAL_PEPTIDE_C_REGION | none | C-terminal region of a signal peptide. | none |
ProSiteProfiles | 153 | 230 | 78 | PS50873 | none | Plant heme peroxidase family profile. | IPR002016 |
SUPERFAMILY | 26 | 132 | 107 | SSF48113 | none | none | IPR010255 |
SUPERFAMILY | 133 | 194 | 62 | SSF48113 | none | none | IPR010255 |
PRINTS | 58 | 72 | 15 | PR00458 | none | Haem peroxidase superfamily signature | IPR002016 |
PRINTS | 117 | 134 | 18 | PR00458 | none | Haem peroxidase superfamily signature | IPR002016 |
PRINTS | 60 | 80 | 21 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
PRINTS | 116 | 126 | 11 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
PRINTS | 36 | 55 | 20 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
PRINTS | 97 | 110 | 14 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
Pfam | 43 | 132 | 90 | PF00141 | none | Peroxidase | IPR002016 |
Pfam | 134 | 193 | 60 | PF00141 | none | Peroxidase | IPR002016 |
ProSiteProfiles | 26 | 148 | 123 | PS50873 | none | Plant heme peroxidase family profile. | IPR002016 |
PANTHER | 12 | 133 | 122 | PTHR31388 | none | none | none |
Phobius | 11 | 21 | 11 | SIGNAL_PEPTIDE_H_REGION | none | Hydrophobic region of a signal peptide. | none |
Phobius | 26 | 230 | 205 | NON_CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | none |
Phobius | 1 | 25 | 25 | SIGNAL_PEPTIDE | none | Signal peptide region | none |
ProSitePatterns | 58 | 69 | 12 | PS00436 | none | Peroxidases active site signature. | IPR019794 |
Gene3D | 133 | 205 | 73 | G3DSA:1.10.520.10 | none | none | none |
Gene3D | 28 | 132 | 105 | G3DSA:1.10.520.10 | none | none | none |
1 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
Bourran2_2015_nEpiBC_3P | Qrob_Chr12 | 12 | s_1B73S5_217 | v_7050_211 | 28,31 | 26,37 | 28,45 | lod | 4.5 | 11.6 |