Protein : Qrob_P0081820.2 Q. robur
Protein Identifier  ? Qrob_P0081820.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K03137 - transcription initiation factor TFIIE subunit beta Gene Prediction Quality  validated
Protein length 

Sequence

Length: 291  
Kegg Orthology  K03137
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0006367 transcription initiation from RNA polymerase II promoter Any process involved in the assembly of the RNA polymerase II preinitiation complex (PIC) at an RNA polymerase II promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter. The initiation phase includes PIC assembly and the formation of the first few bonds in the RNA chain, including abortive initiation, which occurs when the first few nucleotides are repeatedly synthesized and then released. Promoter clearance, or release, is the transition between the initiation and elongation phases of transcription.

19 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0001s09040g 1 285 + 285 Gaps:11 99.30 284 84.04 6e-162 POPTRDRAFT_640520 transcription initiation factor-related family protein
blastp_kegg lcl|csv:101231892 1 284 + 284 Gaps:11 100.00 277 84.84 4e-157 general transcription factor IIE subunit 2-like
blastp_kegg lcl|csv:101211845 1 284 + 284 Gaps:11 100.00 277 84.84 4e-157 general transcription factor IIE subunit 2-like
blastp_kegg lcl|cmo:103493148 1 284 + 284 Gaps:11 100.00 277 84.12 2e-155 general transcription factor IIE subunit 2-like
blastp_kegg lcl|tcc:TCM_016212 1 288 + 288 Gaps:10 100.00 284 75.35 5e-151 Transcription initiation factor IIE subunit beta
blastp_kegg lcl|vvi:100259920 1 290 + 290 Gaps:9 99.30 285 81.98 7e-150 general transcription factor IIE subunit 2-like
blastp_kegg lcl|cic:CICLE_v10021533mg 1 285 + 285 Gaps:13 98.94 283 81.07 9e-148 hypothetical protein
blastp_kegg lcl|cit:102622567 1 285 + 285 Gaps:13 98.94 283 81.07 9e-148 general transcription factor IIE subunit 2-like
blastp_kegg lcl|rcu:RCOM_1686000 1 285 + 285 Gaps:11 99.29 282 80.00 6e-145 Transcription initiation factor IIE subunit beta putative
blastp_kegg lcl|pda:103712778 1 285 + 285 Gaps:11 98.26 287 73.05 2e-143 transcription initiation factor IIE subunit beta
blastp_uniprot_sprot sp|Q54KJ8|T2EB_DICDI 10 278 + 269 Gaps:17 92.03 276 27.56 7e-16 General transcription factor IIE subunit 2 OS Dictyostelium discoideum GN gtf2e2 PE 3 SV 1
blastp_uniprot_sprot sp|P79011|T2EB_SCHPO 98 278 + 181 Gaps:14 62.11 285 30.51 1e-12 Transcription initiation factor IIE subunit beta OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN tfa2 PE 1 SV 2
blastp_uniprot_sprot sp|Q2KJF9|T2EB_BOVIN 100 287 + 188 Gaps:16 64.36 289 26.34 7e-07 General transcription factor IIE subunit 2 OS Bos taurus GN GTF2E2 PE 2 SV 1
blastp_uniprot_sprot sp|P36145|T2EB_YEAST 88 286 + 199 Gaps:29 58.54 328 28.65 2e-06 Transcription initiation factor IIE subunit beta OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN TFA2 PE 1 SV 3
blastp_uniprot_sprot sp|Q9D902|T2EB_MOUSE 100 287 + 188 Gaps:14 63.70 292 27.42 2e-06 General transcription factor IIE subunit 2 OS Mus musculus GN Gtf2e2 PE 2 SV 2
blastp_uniprot_sprot sp|P29084|T2EB_HUMAN 100 287 + 188 Gaps:18 63.92 291 25.81 2e-06 Transcription initiation factor IIE subunit beta OS Homo sapiens GN GTF2E2 PE 1 SV 1
blastp_uniprot_sprot sp|P29540|T2EB_XENLA 100 287 + 188 Gaps:25 64.24 288 27.57 8e-06 General transcription factor IIE subunit 2 OS Xenopus laevis GN gtf2e2 PE 2 SV 1
rpsblast_cdd gnl|CDD|34773 98 284 + 187 Gaps:12 63.51 285 22.65 6e-11 COG5174 TFA2 Transcription initiation factor IIE beta subunit [Transcription].
rpsblast_kog gnl|CDD|38305 1 287 + 287 Gaps:18 98.94 284 33.81 5e-53 KOG3095 KOG3095 KOG3095 Transcription initiation factor IIE beta subunit [Transcription].

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 289 289 PTHR12716:SF8 none none none
PANTHER 1 289 289 PTHR12716 none none none
ProSiteProfiles 61 142 82 PS51351 none TFIIE beta central core DNA-binding domain profile. IPR003166

0 Localization

0 Qtllist

0 Targeting