Protein : Qrob_P0080490.2 Q. robur
Protein Identifier  ? Qrob_P0080490.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 287  
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0 Synonyms

0 GO Terms

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_015929 1 263 + 263 Gaps:46 98.01 301 60.34 2e-115 hypothetical protein
blastp_kegg lcl|pop:POPTR_0001s15540g 1 253 + 253 Gaps:46 94.17 309 57.04 2e-107 hypothetical protein
blastp_kegg lcl|cit:102620272 1 255 + 255 Gaps:75 97.78 270 56.44 1e-78 uncharacterized LOC102620272
blastp_kegg lcl|pda:103717296 6 249 + 244 Gaps:57 73.83 405 33.11 1e-35 uncharacterized LOC103717296
blastp_kegg lcl|pda:103717295 8 249 + 242 Gaps:49 96.59 293 32.51 2e-32 uncharacterized LOC103717295
blastp_kegg lcl|mus:103970884 10 249 + 240 Gaps:61 95.72 304 27.84 2e-20 uncharacterized protein LOC103970884
blastp_kegg lcl|sita:101774482 1 253 + 253 Gaps:77 99.34 304 25.83 1e-19 uncharacterized LOC101774482
blastp_kegg lcl|cic:CICLE_v10023055mg 185 255 + 71 Gaps:17 93.62 94 57.95 3e-19 hypothetical protein
blastp_kegg lcl|sita:101774076 1 253 + 253 Gaps:57 99.32 292 25.17 3e-19 uncharacterized LOC101774076
blastp_kegg lcl|cic:CICLE_v10033619mg 30 250 + 221 Gaps:32 76.76 327 28.29 1e-17 hypothetical protein

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 259 281 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 210 210 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 231 258 28 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 282 286 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 211 230 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

2 Localization

Analysis Start End Length
TMHMM 211 230 19
TMHMM 259 281 22

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
Bourran_2000_2002_QTL1_Delta.F Qrob_Chr11 11 v_AC14YL05_1355 s_2F1WOG_696 10.96 3,25 16,39 lod 25.0121 0.2
Bourran_2000_2002_QTL5_Delta.F Qrob_Chr11 11 s_1BD29X_620 s_2F1WOG_696 2.94 1,08 16,39 lod 5.936 0.05
Bourran2_2014_vEpiBC*_3P Qrob_Chr11 11 s_1A5GRX_415 v_4456_500 9,37 0 19,27 lod 3,513 9,3
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL5_d13Cf Qrob_Chr11 11 s_1BD29X_620 s_1A5BYY_1671 2.26 1,08 11,24 lod 5.8451 0.037

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 21   Secretory pathway 4 0.601 0.061 NON-PLANT 21