Protein : Qrob_P0080480.2 Q. robur
Protein Identifier  ? Qrob_P0080480.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR10909:SF250 - PEROXISOMAL ACYL-COENZYME A OXIDASE 2 (PTHR10909:SF250) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 665  
Kegg Orthology  K00232
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0 Synonyms

9 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0003995 acyl-CoA dehydrogenase activity Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor.
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
GO:0050660 flavin adenine dinucleotide binding Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
GO:0005777 peroxisome A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism.
GO:0006631 fatty acid metabolic process The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.
GO:0003997 acyl-CoA oxidase activity Catalysis of the reaction: acyl-CoA + O2 = trans-2,3-dehydroacyl-CoA + hydrogen peroxide.
GO:0006635 fatty acid beta-oxidation A fatty acid oxidation process that results in the complete oxidation of a long-chain fatty acid. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and occurs by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A; the cycle continues until only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).

47 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10019196mg 1 664 + 664 none 100.00 664 89.61 0.0 hypothetical protein
blastp_kegg lcl|cit:102619982 1 664 + 664 none 100.00 664 89.01 0.0 peroxisomal acyl-coenzyme A oxidase 1-like
blastp_kegg lcl|rcu:RCOM_1119640 1 664 + 664 none 100.00 664 87.80 0.0 acyl-CoA oxidase putative (EC:1.9.3.1)
blastp_kegg lcl|fve:101295713 1 664 + 664 none 100.00 664 86.60 0.0 peroxisomal acyl-coenzyme A oxidase 1-like
blastp_kegg lcl|tcc:TCM_015928 1 664 + 664 none 100.00 664 86.60 0.0 Acyl-CoA oxidase 1
blastp_kegg lcl|sly:778338 1 664 + 664 none 100.00 664 86.45 0.0 Acx1A peroxisomal acyl-CoA oxidase 1A
blastp_kegg lcl|cam:101491397 5 664 + 660 none 99.40 664 87.42 0.0 peroxisomal acyl-coenzyme A oxidase 1-like
blastp_kegg lcl|pop:POPTR_0003s07690g 1 664 + 664 Gaps:1 100.00 663 87.78 0.0 POPTRDRAFT_646132 acyl-CoA oxidase family protein
blastp_kegg lcl|sot:102587406 1 664 + 664 none 100.00 664 86.14 0.0 peroxisomal acyl-coenzyme A oxidase 1-like
blastp_kegg lcl|pop:POPTR_0001s15530g 1 664 + 664 none 100.00 664 86.75 0.0 acyl-CoA oxidase family protein
blastp_pdb 2fon_C 1 664 + 664 none 97.22 683 86.45 0.0 mol:protein length:683 peroxisomal acyl-CoA oxidase 1A
blastp_pdb 2fon_B 1 664 + 664 none 97.22 683 86.45 0.0 mol:protein length:683 peroxisomal acyl-CoA oxidase 1A
blastp_pdb 2fon_A 1 664 + 664 none 97.22 683 86.45 0.0 mol:protein length:683 peroxisomal acyl-CoA oxidase 1A
blastp_pdb 1w07_B 1 659 + 659 none 100.00 659 81.94 0.0 mol:protein length:659 ACYL-COA OXIDASE
blastp_pdb 1w07_A 1 659 + 659 none 100.00 659 81.94 0.0 mol:protein length:659 ACYL-COA OXIDASE
blastp_pdb 2ddh_A 7 654 + 648 Gaps:25 98.79 661 45.02 0.0 mol:protein length:661 Acyl-CoA oxidase
blastp_pdb 1is2_B 7 654 + 648 Gaps:25 98.79 661 45.02 0.0 mol:protein length:661 acyl-CoA oxidase
blastp_pdb 1is2_A 7 654 + 648 Gaps:25 98.79 661 45.02 0.0 mol:protein length:661 acyl-CoA oxidase
blastp_pdb 3sf6_A 109 298 + 190 Gaps:30 41.19 403 36.14 7e-10 mol:protein length:403 Glutaryl-CoA dehydrogenase
blastp_pdb 3pfd_D 113 440 + 328 Gaps:58 71.25 393 30.36 8e-10 mol:protein length:393 Acyl-CoA dehydrogenase
blastp_uniprot_sprot sp|O65202|ACOX1_ARATH 1 664 + 664 none 100.00 664 82.08 0.0 Peroxisomal acyl-coenzyme A oxidase 1 OS Arabidopsis thaliana GN ACX1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZQP2|ACO12_ARATH 1 664 + 664 none 100.00 664 80.42 0.0 Putative peroxisomal acyl-coenzyme A oxidase 1.2 OS Arabidopsis thaliana GN ACX1.2 PE 2 SV 1
blastp_uniprot_sprot sp|P07872|ACOX1_RAT 7 654 + 648 Gaps:29 98.79 661 45.48 0.0 Peroxisomal acyl-coenzyme A oxidase 1 OS Rattus norvegicus GN Acox1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9R0H0|ACOX1_MOUSE 7 654 + 648 Gaps:25 98.79 661 44.56 0.0 Peroxisomal acyl-coenzyme A oxidase 1 OS Mus musculus GN Acox1 PE 1 SV 5
blastp_uniprot_sprot sp|Q9Z1N0|ACOX1_CAVPO 7 654 + 648 Gaps:27 98.79 661 45.64 0.0 Peroxisomal acyl-coenzyme A oxidase 1 OS Cavia porcellus GN ACOX1 PE 2 SV 1
blastp_uniprot_sprot sp|Q3SZP5|ACOX1_BOVIN 7 647 + 641 Gaps:27 97.88 660 45.05 0.0 Peroxisomal acyl-coenzyme A oxidase 1 OS Bos taurus GN ACOX1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8HYL8|ACOX1_PHACI 7 654 + 648 Gaps:27 98.79 661 43.64 0.0 Peroxisomal acyl-coenzyme A oxidase 1 OS Phascolarctos cinereus GN ACOX1 PE 1 SV 2
blastp_uniprot_sprot sp|Q5RC19|ACOX1_PONAB 7 647 + 641 Gaps:23 97.88 660 44.27 3e-180 Peroxisomal acyl-coenzyme A oxidase 1 OS Pongo abelii GN ACOX1 PE 2 SV 2
blastp_uniprot_sprot sp|Q15067|ACOX1_HUMAN 7 647 + 641 Gaps:23 97.88 660 44.27 3e-179 Peroxisomal acyl-coenzyme A oxidase 1 OS Homo sapiens GN ACOX1 PE 1 SV 3
blastp_uniprot_sprot sp|O02767|ACOX2_RABIT 7 656 + 650 Gaps:16 96.04 681 37.31 3e-145 Peroxisomal acyl-coenzyme A oxidase 2 OS Oryctolagus cuniculus GN ACOX2 PE 1 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 134 192 59 PF02770 none Acyl-CoA dehydrogenase, middle domain IPR006091
Gene3D 481 608 128 G3DSA:1.20.140.10 none none none
PIRSF 1 659 659 PIRSF000168 "KEGG:00071+1.3.3.6","KEGG:00592+1.3.3.6","MetaCyc:PWY-5136","MetaCyc:PWY-6837","MetaCyc:PWY-6920","MetaCyc:PWY-7007","MetaCyc:PWY-7288","MetaCyc:PWY-7291","MetaCyc:PWY-7337","MetaCyc:PWY-7338","MetaCyc:PWY-7340","MetaCyc:PWY-735","MetaCyc:PWY-7606" none IPR012258
PANTHER 5 482 478 PTHR10909 none none none
Pfam 18 132 115 PF14749 "KEGG:00071+1.3.3.6","KEGG:00592+1.3.3.6","MetaCyc:PWY-5136","MetaCyc:PWY-6837","MetaCyc:PWY-6920","MetaCyc:PWY-7007","MetaCyc:PWY-7288","MetaCyc:PWY-7291","MetaCyc:PWY-7337","MetaCyc:PWY-7338","MetaCyc:PWY-7340","MetaCyc:PWY-735","MetaCyc:PWY-7606" Acyl-coenzyme A oxidase N-terminal IPR029320
Gene3D 133 266 134 G3DSA:2.40.110.10 none none IPR006091
Gene3D 284 445 162 G3DSA:1.20.140.10 none none none
Pfam 476 657 182 PF01756 "KEGG:00071+1.3.3.6","KEGG:00592+1.3.3.6","MetaCyc:PWY-5136","MetaCyc:PWY-6837","MetaCyc:PWY-6920","MetaCyc:PWY-7007","MetaCyc:PWY-7288","MetaCyc:PWY-7291","MetaCyc:PWY-7337","MetaCyc:PWY-7338","MetaCyc:PWY-7340","MetaCyc:PWY-735","MetaCyc:PWY-7606" Acyl-CoA oxidase IPR002655
SUPERFAMILY 276 459 184 SSF47203 none none IPR009075
SUPERFAMILY 464 657 194 SSF47203 none none IPR009075
PANTHER 5 482 478 PTHR10909:SF250 none none none
SUPERFAMILY 44 260 217 SSF56645 none none IPR009100
Gene3D 18 132 115 G3DSA:1.10.540.10 none none IPR013786

0 Localization

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
Bourran_2000_2002_QTL1_Delta.F Qrob_Chr11 11 v_AC14YL05_1355 s_2F1WOG_696 10.96 3,25 16,39 lod 25.0121 0.2
Bourran_2000_2002_QTL5_Delta.F Qrob_Chr11 11 s_1BD29X_620 s_2F1WOG_696 2.94 1,08 16,39 lod 5.936 0.05
Bourran2_2014_vEpiBC*_3P Qrob_Chr11 11 s_1A5GRX_415 v_4456_500 9,37 0 19,27 lod 3,513 9,3
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL5_d13Cf Qrob_Chr11 11 s_1BD29X_620 s_1A5BYY_1671 2.26 1,08 11,24 lod 5.8451 0.037

0 Targeting