Protein : Qrob_P0080460.2 Q. robur
Protein Identifier  ? Qrob_P0080460.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 504  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

0 GO Terms

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103337062 3 497 + 495 Gaps:12 99.80 494 70.79 0.0 uncharacterized LOC103337062
blastp_kegg lcl|rcu:RCOM_0975840 22 499 + 478 Gaps:15 95.45 506 69.57 0.0 hypothetical protein
blastp_kegg lcl|vvi:100266043 42 503 + 462 Gaps:19 92.74 482 74.05 0.0 uncharacterized LOC100266043
blastp_kegg lcl|cit:102619700 1 499 + 499 Gaps:15 100.00 496 66.33 0.0 uncharacterized LOC102619700
blastp_kegg lcl|cic:CICLE_v10019844mg 1 499 + 499 Gaps:15 100.00 496 66.13 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0003s07710g 48 496 + 449 Gaps:10 89.39 509 72.09 0.0 POPTRDRAFT_553897 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa004518mg 3 497 + 495 Gaps:23 99.80 505 66.27 0.0 hypothetical protein
blastp_kegg lcl|pxb:103936087 3 497 + 495 Gaps:13 99.80 493 65.24 0.0 uncharacterized LOC103936087
blastp_kegg lcl|pxb:103936079 3 497 + 495 Gaps:13 99.80 493 65.24 0.0 uncharacterized LOC103936079
blastp_kegg lcl|fve:101295132 57 497 + 441 Gaps:10 90.14 487 71.98 0.0 uncharacterized protein LOC101295132

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 26 47 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 48 503 456 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 25 25 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

1 Localization

Analysis Start End Length
TMHMM 26 48 22

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
Bourran_2000_2002_QTL1_Delta.F Qrob_Chr11 11 v_AC14YL05_1355 s_2F1WOG_696 10.96 3,25 16,39 lod 25.0121 0.2
Bourran_2000_2002_QTL5_Delta.F Qrob_Chr11 11 s_1BD29X_620 s_2F1WOG_696 2.94 1,08 16,39 lod 5.936 0.05
Bourran2_2014_vEpiBC*_3P Qrob_Chr11 11 s_1A5GRX_415 v_4456_500 9,37 0 19,27 lod 3,513 9,3
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL5_d13Cf Qrob_Chr11 11 s_1BD29X_620 s_1A5BYY_1671 2.26 1,08 11,24 lod 5.8451 0.037

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 32   Mitochondrion 5 0.316 0.424 NON-PLANT 32