Protein : Qrob_P0080400.2 Q. robur
Protein Identifier  ? Qrob_P0080400.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) PF07797 - Protein of unknown function (DUF1639) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 252  
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0 Synonyms

0 GO Terms

11 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103482589 1 234 + 234 Gaps:17 99.59 246 53.06 2e-74 uncharacterized LOC103482589
blastp_kegg lcl|csv:101222282 1 234 + 234 Gaps:35 99.59 246 54.29 3e-74 uncharacterized LOC101222282
blastp_kegg lcl|mtr:MTR_4g100570 1 234 + 234 Gaps:22 99.59 243 55.37 4e-68 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa010718mg 1 246 + 246 Gaps:16 100.00 238 52.10 4e-65 hypothetical protein
blastp_kegg lcl|fve:101293977 1 234 + 234 Gaps:16 99.58 239 53.78 7e-62 uncharacterized protein LOC101293977
blastp_kegg lcl|pmum:103337059 1 234 + 234 Gaps:22 99.56 229 51.32 1e-61 uncharacterized LOC103337059
blastp_kegg lcl|pvu:PHAVU_003G223000g 1 234 + 234 Gaps:29 81.37 306 55.42 9e-60 hypothetical protein
blastp_kegg lcl|vvi:100853295 1 234 + 234 Gaps:31 99.58 240 54.39 2e-59 uncharacterized LOC100853295
blastp_kegg lcl|tcc:TCM_015920 1 234 + 234 Gaps:18 99.55 223 54.50 9e-58 Uncharacterized protein isoform 1
blastp_kegg lcl|cam:101492028 2 234 + 233 Gaps:27 98.35 242 57.98 4e-57 uncharacterized LOC101492028
rpsblast_cdd gnl|CDD|203765 177 226 + 50 none 100.00 50 74.00 1e-19 pfam07797 DUF1639 Protein of unknown function (DUF1639). This approximately 50 residue region is found in a number of sequences derived from hypothetical plant proteins. This region features a highly basic 5 amino-acid stretch towards its centre.

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 251 251 1 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 230 230 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 231 250 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 177 226 50 PF07797 none Protein of unknown function (DUF1639) IPR012438

0 Localization

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
Bourran_2000_2002_QTL1_Delta.F Qrob_Chr11 11 v_AC14YL05_1355 s_2F1WOG_696 10.96 3,25 16,39 lod 25.0121 0.2
Bourran_2000_2002_QTL5_Delta.F Qrob_Chr11 11 s_1BD29X_620 s_2F1WOG_696 2.94 1,08 16,39 lod 5.936 0.05
Bourran2_2014_vEpiBC*_3P Qrob_Chr11 11 s_1A5GRX_415 v_4456_500 9,37 0 19,27 lod 3,513 9,3
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL5_d13Cf Qrob_Chr11 11 s_1BD29X_620 s_1A5BYY_1671 2.26 1,08 11,24 lod 5.8451 0.037

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 62   Mitochondrion 5 0.026 0.648 NON-PLANT 62