Protein : Qrob_P0080380.2 Q. robur
Protein Identifier  ? Qrob_P0080380.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) KOG0078//KOG0079//KOG0080//KOG0084//KOG0086//KOG0087//KOG0091//KOG0097//KOG0098//KOG0394 - GTP-binding protein SEC4 small G protein superfamily and related Ras family GTP-binding proteins [Signal transduction mechanisms Intracellular trafficking secretion and vesicular transport]. // GTP-binding protein H-ray small G protein superfamily [General function prediction only]. // GTPase Rab18 small G protein superfamily [General function prediction only]. // GTPase Rab1/YPT1 small G protein superfamily and related GTP-binding proteins [Signal transduction mechanisms Intracellular trafficking secretion and vesicular transport]. // GTPase Rab4 small G protein superfamily [Intracellular trafficking secretion and vesicular transport]. // GTPase Rab11/YPT3 small G protein superfamily [Intracellular trafficking secretion and vesicular transport]. // GTPase Rab39 small G protein superfamily [General function prediction only]. // GTPase Rab14 small G protein superfamily [Intracellular trafficking secretion and vesicular transport]. // GTPase Rab2 small G protein superfamily [Intracellular trafficking secretion and vesicular transport]. // Ras-related GTPase [General function prediction only]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 336  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0031072 heat shock protein binding Interacting selectively and non-covalently with a heat shock protein, any protein synthesized or activated in response to heat shock.
GO:0051082 unfolded protein binding Interacting selectively and non-covalently with an unfolded protein.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0015031 protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0007264 small GTPase mediated signal transduction Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0660490 191 325 + 135 Gaps:10 71.43 175 68.80 1e-48 hypothetical protein
blastp_kegg lcl|pop:POPTR_0009s13250g 216 325 + 110 Gaps:3 35.43 302 77.57 3e-47 PROLINE-RICH protein 4
blastp_kegg lcl|pop:POPTR_0004s17590g 207 318 + 112 Gaps:3 32.15 339 73.39 8e-47 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10028101mg 216 325 + 110 none 19.40 567 70.91 2e-43 hypothetical protein
blastp_kegg lcl|vvi:100245206 216 325 + 110 none 21.96 501 70.91 5e-43 uncharacterized LOC100245206
blastp_kegg lcl|cit:102619149 216 325 + 110 none 21.91 502 69.09 1e-42 proline-rich protein 4-like
blastp_kegg lcl|tcc:TCM_006689 216 320 + 105 none 20.00 525 66.67 2e-38 Proline-rich protein 2
blastp_kegg lcl|mdm:103428104 216 321 + 106 Gaps:3 29.46 370 66.97 5e-38 proline-rich protein 4-like
blastp_kegg lcl|mdm:103436235 216 321 + 106 Gaps:3 23.54 463 66.97 1e-37 proline-rich protein 4
blastp_kegg lcl|pvu:PHAVU_003G162000g 94 187 + 94 Gaps:1 88.57 105 69.89 2e-37 hypothetical protein
blastp_pdb 1z0a_D 19 66 + 48 none 27.59 174 87.50 1e-21 mol:protein length:174 Ras-related protein Rab-2A
blastp_pdb 1z0a_C 19 66 + 48 none 27.59 174 87.50 1e-21 mol:protein length:174 Ras-related protein Rab-2A
blastp_pdb 1z0a_B 19 66 + 48 none 27.59 174 87.50 1e-21 mol:protein length:174 Ras-related protein Rab-2A
blastp_pdb 1z0a_A 19 66 + 48 none 27.59 174 87.50 1e-21 mol:protein length:174 Ras-related protein Rab-2A
blastp_pdb 2a5j_A 19 66 + 48 none 25.13 191 83.33 2e-20 mol:protein length:191 Ras-related protein Rab-2B
blastp_pdb 1z0f_A 18 66 + 49 none 27.37 179 57.14 2e-10 mol:protein length:179 RAB14 member RAS oncogene family
blastp_pdb 4drz_A 18 66 + 49 none 25.00 196 57.14 2e-10 mol:protein length:196 Ras-related protein Rab-14
blastp_pdb 1z0k_C 19 66 + 48 none 27.91 172 52.08 1e-09 mol:protein length:172 GTP-binding protein
blastp_pdb 1z0k_A 19 66 + 48 none 27.91 172 52.08 1e-09 mol:protein length:172 GTP-binding protein
blastp_pdb 1yu9_A 19 66 + 48 none 27.43 175 52.08 1e-09 mol:protein length:175 GTP-binding protein
blastp_uniprot_sprot sp|Q9T0I5|PRP4_ARATH 216 323 + 108 Gaps:1 24.33 448 54.13 3e-29 Proline-rich protein 4 OS Arabidopsis thaliana GN PRP4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SKP9|PRP2_ARATH 216 315 + 100 Gaps:3 32.09 321 50.49 7e-24 Proline-rich protein 2 OS Arabidopsis thaliana GN PRP2 PE 2 SV 1
blastp_uniprot_sprot sp|P49104|RAB2B_MAIZE 19 66 + 48 none 22.86 210 91.67 1e-22 Ras-related protein Rab-2-B OS Zea mays GN RAB2B PE 2 SV 1
blastp_uniprot_sprot sp|P92963|RAB1C_ARATH 19 66 + 48 none 22.75 211 91.67 2e-22 Ras-related protein RABB1c OS Arabidopsis thaliana GN RABB1C PE 2 SV 1
blastp_uniprot_sprot sp|P49103|RAB2A_MAIZE 19 66 + 48 none 22.97 209 89.58 6e-22 Ras-related protein Rab-2-A OS Zea mays GN RAB2A PE 1 SV 1
blastp_uniprot_sprot sp|P36409|RAB2A_DICDI 19 66 + 48 none 23.19 207 89.58 3e-21 Ras-related protein Rab-2A OS Dictyostelium discoideum GN rab2A PE 2 SV 2
blastp_uniprot_sprot sp|Q38922|RAB1B_ARATH 19 66 + 48 none 22.75 211 83.33 7e-21 Ras-related protein RABB1b OS Arabidopsis thaliana GN RABB1B PE 2 SV 1
blastp_uniprot_sprot sp|O23561|RAB1A_ARATH 19 66 + 48 none 23.41 205 85.42 7e-21 Ras-related protein RABB1a OS Arabidopsis thaliana GN RABB1A PE 2 SV 1
blastp_uniprot_sprot sp|P53994|RAB2A_MOUSE 19 66 + 48 none 22.64 212 87.50 1e-20 Ras-related protein Rab-2A OS Mus musculus GN Rab2a PE 1 SV 1
blastp_uniprot_sprot sp|Q90965|RAB2A_CHICK 19 66 + 48 none 22.64 212 87.50 1e-20 Ras-related protein Rab-2A OS Gallus gallus GN RAB2A PE 2 SV 1

18 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 51 73 23 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 10 31 22 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 33 49 17 PR00449 none Transforming protein P21 ras signature IPR001806
PANTHER 19 64 46 PTHR24073 none none none
SUPERFAMILY 19 67 49 SSF52540 none none IPR027417
SMART 17 112 96 SM00175 none Rab subfamily of small GTPases IPR003579
Phobius 13 17 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 19 64 46 PF00071 none Ras family IPR001806
Phobius 217 335 119 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 216 278 63 PF01190 none Pollen proteins Ole e I like none
SUPERFAMILY 138 187 50 SSF57938 none none IPR001305
Gene3D 19 66 48 G3DSA:3.40.50.300 none none IPR027417
Phobius 1 17 17 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 19 64 46 PTHR24073:SF359 none none none
Phobius 18 190 173 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 4 12 9 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 191 216 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

1 Localization

Analysis Start End Length
TMHMM 194 216 22

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
Bourran_2000_2002_QTL1_Delta.F Qrob_Chr11 11 v_AC14YL05_1355 s_2F1WOG_696 10.96 3,25 16,39 lod 25.0121 0.2
Bourran_2000_2002_QTL5_Delta.F Qrob_Chr11 11 s_1BD29X_620 s_2F1WOG_696 2.94 1,08 16,39 lod 5.936 0.05
Bourran2_2014_vEpiBC*_3P Qrob_Chr11 11 s_1A5GRX_415 v_4456_500 9,37 0 19,27 lod 3,513 9,3
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL5_d13Cf Qrob_Chr11 11 s_1BD29X_620 s_1A5BYY_1671 2.26 1,08 11,24 lod 5.8451 0.037

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 17   Secretory pathway 5 0.485 0.101 NON-PLANT 17