10 Blast
Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
---|---|---|---|---|---|---|---|---|---|---|---|
blastp_kegg | lcl|pper:PRUPE_ppa019199mg | 16 | 473 | + | 458 | Gaps:87 | 99.84 | 633 | 44.94 | 3e-91 | hypothetical protein |
blastp_kegg | lcl|pmum:103337675 | 22 | 482 | + | 461 | Gaps:106 | 99.53 | 644 | 45.24 | 6e-91 | myosin heavy chain fast skeletal muscle |
blastp_kegg | lcl|fve:101304876 | 1 | 479 | + | 479 | Gaps:55 | 75.03 | 941 | 42.35 | 8e-91 | uncharacterized protein LOC101304876 |
blastp_kegg | lcl|pxb:103943755 | 39 | 481 | + | 443 | Gaps:98 | 99.02 | 611 | 44.46 | 1e-86 | early endosome antigen 1 |
blastp_kegg | lcl|mdm:103454626 | 1 | 476 | + | 476 | Gaps:115 | 78.80 | 830 | 45.26 | 3e-80 | intracellular protein transport protein USO1 |
blastp_kegg | lcl|pxb:103928889 | 1 | 481 | + | 481 | Gaps:65 | 80.15 | 826 | 42.60 | 3e-78 | uncharacterized protein PFB0765w-like |
blastp_kegg | lcl|cam:101504512 | 39 | 474 | + | 436 | Gaps:100 | 79.40 | 869 | 36.67 | 5e-76 | intracellular protein transport protein USO1-like |
blastp_kegg | lcl|pop:POPTR_0003s13710g | 5 | 476 | + | 472 | Gaps:72 | 85.67 | 712 | 41.31 | 2e-73 | POPTRDRAFT_554464 myosin heavy chain-related family protein |
blastp_kegg | lcl|csv:101207367 | 59 | 471 | + | 413 | Gaps:51 | 73.50 | 566 | 41.59 | 3e-69 | uncharacterized LOC101207367 |
blastp_kegg | lcl|cmo:103493264 | 133 | 471 | + | 339 | Gaps:36 | 55.83 | 600 | 45.67 | 1e-68 | intracellular protein transport protein USO1 |
8 Domain Motifs
Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
---|---|---|---|---|---|---|---|
Coils | 7 | 28 | 22 | Coil | none | none | none |
Coils | 127 | 148 | 22 | Coil | none | none | none |
Coils | 173 | 208 | 36 | Coil | none | none | none |
Coils | 285 | 313 | 29 | Coil | none | none | none |
Coils | 238 | 266 | 29 | Coil | none | none | none |
Coils | 400 | 453 | 54 | Coil | none | none | none |
Coils | 32 | 67 | 36 | Coil | none | none | none |
Coils | 334 | 355 | 22 | Coil | none | none | none |
5 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
Bourran2_2015_nEpiBC_3P | Qrob_Chr12 | 12 | s_1B73S5_217 | v_7050_211 | 28,31 | 26,37 | 28,45 | lod | 4.5 | 11.6 |
Bourran2_2015_nP_3P | Qrob_Chr12 | 12 | v_10140_295 | v_838_303 | 16 | 14,69 | 18,01 | lod | 5.1 | 13.7 |
Bourran2_2015_nSecLBD_3P | Qrob_Chr12 | 12 | s_A4YYC_633 | s_2F1IZB_703 | 18,64 | 18,01 | 21,53 | lod | 6.5 | 17.2 |
Bourran2_2002_QTL17_peak_Bud_burst_A4 | Qrob_Chr12 | 12 | s_1CTJ3J_556 | s_1CTJ3J_556 | 0 | 0 | 25 | lod | 2,9 | 6 |
Bourran2_2014_nSeqBC_3P | Qrob_Chr12 | 12 | s_1EO8V5_710 | s_1A2VMU_355 | 11,04 | 0 | 32,58 | lod | 1,7196 | 4,7 |