Protein : Qrob_P0079140.2 Q. robur
Protein Identifier  ? Qrob_P0079140.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR10996//PTHR10996:SF109 - 2-HYDROXYACID DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 428  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0051287 NAD binding Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100243152 1 427 + 427 none 44.85 952 83.84 0.0 C-terminal binding protein AN-like
blastp_kegg lcl|tcc:TCM_005268 1 427 + 427 Gaps:2 65.69 647 81.88 0.0 NAD(P)-binding Rossmann-fold superfamily protein
blastp_kegg lcl|pmum:103332071 1 427 + 427 Gaps:3 44.21 959 83.02 0.0 C-terminal binding protein AN
blastp_kegg lcl|pop:POPTR_0014s08530g 1 427 + 427 Gaps:12 65.32 666 79.54 0.0 POPTRDRAFT_572304 hypothetical protein
blastp_kegg lcl|mdm:103439206 1 427 + 427 Gaps:3 65.94 643 81.13 0.0 C-terminal binding protein AN
blastp_kegg lcl|rcu:RCOM_1616510 1 427 + 427 Gaps:2 45.70 930 83.06 0.0 2-hydroxyacid dehydrogenase putative (EC:1.1.1.29)
blastp_kegg lcl|pxb:103956312 1 427 + 427 Gaps:3 65.94 643 80.66 0.0 C-terminal binding protein AN-like
blastp_kegg lcl|pvu:PHAVU_008G058900g 1 427 + 427 Gaps:10 67.69 616 80.82 0.0 hypothetical protein
blastp_kegg lcl|fve:101310639 1 427 + 427 Gaps:3 44.49 953 81.13 0.0 C-terminal binding protein AN-like
blastp_kegg lcl|pxb:103941333 1 427 + 427 Gaps:4 65.58 645 81.32 0.0 C-terminal binding protein AN-like
blastp_pdb 1mx3_A 1 110 + 110 Gaps:2 32.28 347 39.29 2e-16 mol:protein length:347 C-terminal binding protein 1
blastp_pdb 2hu2_A 1 110 + 110 Gaps:2 31.28 358 39.29 2e-16 mol:protein length:358 C-terminal-binding protein 1
blastp_pdb 1hl3_A 1 110 + 110 Gaps:2 31.28 358 39.29 2e-16 mol:protein length:358 C-TERMINAL BINDING PROTEIN 3
blastp_pdb 1hku_A 1 110 + 110 Gaps:2 31.28 358 39.29 2e-16 mol:protein length:358 C-TERMINAL BINDING PROTEIN 3
blastp_pdb 3ga0_A 1 110 + 110 Gaps:2 31.28 358 39.29 3e-16 mol:protein length:358 C-terminal-binding protein 1
blastp_pdb 2ome_H 3 112 + 110 Gaps:2 33.33 336 39.29 3e-16 mol:protein length:336 C-terminal-binding protein 2
blastp_pdb 2ome_G 3 112 + 110 Gaps:2 33.33 336 39.29 3e-16 mol:protein length:336 C-terminal-binding protein 2
blastp_pdb 2ome_F 3 112 + 110 Gaps:2 33.33 336 39.29 3e-16 mol:protein length:336 C-terminal-binding protein 2
blastp_pdb 2ome_E 3 112 + 110 Gaps:2 33.33 336 39.29 3e-16 mol:protein length:336 C-terminal-binding protein 2
blastp_pdb 2ome_D 3 112 + 110 Gaps:2 33.33 336 39.29 3e-16 mol:protein length:336 C-terminal-binding protein 2
blastp_uniprot_sprot sp|O23702|CTBP_ARATH 1 427 + 427 Gaps:6 66.51 636 71.63 0.0 C-terminal binding protein AN OS Arabidopsis thaliana GN AN PE 1 SV 1
blastp_uniprot_sprot sp|Q9YHU0|CTBP1_XENLA 1 110 + 110 Gaps:2 25.45 440 39.29 1e-15 C-terminal-binding protein 1 OS Xenopus laevis GN ctbp1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9Z2F5|CTBP1_RAT 1 110 + 110 Gaps:2 26.05 430 39.29 2e-15 C-terminal-binding protein 1 OS Rattus norvegicus GN Ctbp1 PE 1 SV 3
blastp_uniprot_sprot sp|O88712|CTBP1_MOUSE 1 110 + 110 Gaps:2 25.40 441 39.29 2e-15 C-terminal-binding protein 1 OS Mus musculus GN Ctbp1 PE 1 SV 2
blastp_uniprot_sprot sp|Q13363|CTBP1_HUMAN 1 110 + 110 Gaps:2 25.45 440 39.29 2e-15 C-terminal-binding protein 1 OS Homo sapiens GN CTBP1 PE 1 SV 2
blastp_uniprot_sprot sp|P56545|CTBP2_HUMAN 3 112 + 110 Gaps:2 25.17 445 39.29 4e-15 C-terminal-binding protein 2 OS Homo sapiens GN CTBP2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9EQH5|CTBP2_RAT 3 112 + 110 Gaps:2 25.17 445 39.29 4e-15 C-terminal-binding protein 2 OS Rattus norvegicus GN Ctbp2 PE 1 SV 2
blastp_uniprot_sprot sp|Q0VCQ1|CTBP2_BOVIN 3 112 + 110 Gaps:2 25.17 445 39.29 4e-15 C-terminal-binding protein 2 OS Bos taurus GN CTBP2 PE 1 SV 1
blastp_uniprot_sprot sp|P56546|CTBP2_MOUSE 3 112 + 110 Gaps:2 25.17 445 39.29 4e-15 C-terminal-binding protein 2 OS Mus musculus GN Ctbp2 PE 1 SV 2
blastp_uniprot_sprot sp|Q9W758|CTBP2_XENLA 1 110 + 110 Gaps:2 25.63 437 40.18 5e-15 C-terminal-binding protein 2 OS Xenopus laevis GN ctbp2 PE 1 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 2 93 92 PF02826 none D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IPR006140
SUPERFAMILY 2 96 95 SSF51735 none none none
PANTHER 1 190 190 PTHR10996:SF109 none none none
Gene3D 2 97 96 G3DSA:3.40.50.720 none none IPR016040
PANTHER 1 190 190 PTHR10996 none none none

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 30   Secretory pathway 4 0.736 0.022 NON-PLANT 30