Protein : Qrob_P0076530.2 Q. robur
Protein Identifier  ? Qrob_P0076530.2 Organism . Name  Quercus robur
Score  98.1 Score Type  egn
Protein Description  (M=34) K05391 - cyclic nucleotide gated channel, other eukaryote Gene Prediction Quality  validated
Protein length 

Sequence

Length: 684  
Kegg Orthology  K05391
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0005216 ion channel activity Enables the facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. May be either selective (it enables passage of a specific ion only) or non-selective (it enables passage of two or more ions of same charge but different size).
GO:0006811 ion transport The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103332242 3 652 + 650 Gaps:37 91.40 721 65.25 0.0 cyclic nucleotide-gated ion channel 1-like
blastp_kegg lcl|pper:PRUPE_ppa002071mg 3 652 + 650 Gaps:33 91.40 721 64.95 0.0 hypothetical protein
blastp_kegg lcl|pxb:103929332 15 652 + 638 Gaps:24 89.01 719 63.59 0.0 cyclic nucleotide-gated ion channel 1-like
blastp_kegg lcl|mdm:103439360 15 683 + 669 Gaps:42 96.23 716 61.25 0.0 cyclic nucleotide-gated ion channel 1-like
blastp_kegg lcl|mdm:103414450 8 652 + 645 Gaps:26 90.01 721 63.02 0.0 cyclic nucleotide-gated ion channel 1
blastp_kegg lcl|fve:101292339 5 649 + 645 Gaps:30 89.99 719 62.13 0.0 cyclic nucleotide-gated ion channel 1-like
blastp_kegg lcl|pmum:103332244 3 652 + 650 Gaps:33 91.40 721 63.88 0.0 cyclic nucleotide-gated ion channel 1-like
blastp_kegg lcl|pper:PRUPE_ppa026143mg 3 652 + 650 Gaps:49 91.61 739 62.33 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0014s09350g 5 678 + 674 Gaps:42 96.82 723 58.29 0.0 POPTRDRAFT_1098575 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10019048mg 3 682 + 680 Gaps:55 98.75 722 59.19 0.0 hypothetical protein
blastp_pdb 1wgp_A 481 599 + 119 Gaps:5 90.51 137 61.29 3e-42 mol:protein length:137 Probable cyclic nucleotide-gated ion channel
blastp_pdb 2ptm_A 416 552 + 137 Gaps:1 68.69 198 26.47 3e-10 mol:protein length:198 Hyperpolarization-activated (Ih) channel
blastp_pdb 3u0z_B 420 552 + 133 Gaps:2 62.38 210 29.77 3e-10 mol:protein length:210 Potassium/sodium hyperpolarization-activated
blastp_pdb 3u0z_A 420 552 + 133 Gaps:2 62.38 210 29.77 3e-10 mol:protein length:210 Potassium/sodium hyperpolarization-activated
blastp_pdb 3u11_B 420 552 + 133 Gaps:2 62.38 210 29.77 4e-10 mol:protein length:210 Potassium/sodium hyperpolarization-activated
blastp_pdb 3u11_A 420 552 + 133 Gaps:2 62.38 210 29.77 4e-10 mol:protein length:210 Potassium/sodium hyperpolarization-activated
blastp_pdb 3otf_A 420 552 + 133 Gaps:2 59.55 220 29.77 6e-10 mol:protein length:220 Potassium/sodium hyperpolarization-activated
blastp_pdb 3u10_A 420 552 + 133 Gaps:2 62.38 210 29.77 7e-10 mol:protein length:210 Potassium/sodium hyperpolarization-activated
blastp_pdb 3ffq_B 420 552 + 133 Gaps:2 64.85 202 29.77 7e-10 mol:protein length:202 Potassium/sodium hyperpolarization-activated
blastp_pdb 3ffq_A 420 552 + 133 Gaps:2 64.85 202 29.77 7e-10 mol:protein length:202 Potassium/sodium hyperpolarization-activated
blastp_uniprot_sprot sp|Q9LNJ0|CNG10_ARATH 3 680 + 678 Gaps:62 97.89 711 57.18 0.0 Probable cyclic nucleotide-gated ion channel 10 OS Arabidopsis thaliana GN CNGC10 PE 2 SV 2
blastp_uniprot_sprot sp|O65717|CNGC1_ARATH 8 682 + 675 Gaps:50 97.35 716 58.97 0.0 Cyclic nucleotide-gated ion channel 1 OS Arabidopsis thaliana GN CNGC1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LD40|CNG13_ARATH 15 679 + 665 Gaps:49 96.84 696 57.12 0.0 Putative cyclic nucleotide-gated ion channel 13 OS Arabidopsis thaliana GN CNGC13 PE 3 SV 2
blastp_uniprot_sprot sp|Q9SKD7|CNGC3_ARATH 25 678 + 654 Gaps:47 95.89 706 55.39 0.0 Probable cyclic nucleotide-gated ion channel 3 OS Arabidopsis thaliana GN CNGC3 PE 2 SV 2
blastp_uniprot_sprot sp|Q9M0A4|CNGC9_ARATH 5 682 + 678 Gaps:39 95.36 733 49.64 0.0 Putative cyclic nucleotide-gated ion channel 9 OS Arabidopsis thaliana GN CNGC9 PE 1 SV 1
blastp_uniprot_sprot sp|O82226|CNGC6_ARATH 5 683 + 679 Gaps:61 95.58 747 48.04 0.0 Probable cyclic nucleotide-gated ion channel 6 OS Arabidopsis thaliana GN CNGC6 PE 1 SV 2
blastp_uniprot_sprot sp|Q8RWS9|CNGC5_ARATH 35 681 + 647 Gaps:39 93.17 717 49.25 0.0 Probable cyclic nucleotide-gated ion channel 5 OS Arabidopsis thaliana GN CNGC5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FXH6|CNGC8_ARATH 36 630 + 595 Gaps:37 80.21 753 51.16 0.0 Putative cyclic nucleotide-gated ion channel 8 OS Arabidopsis thaliana GN CNGC8 PE 3 SV 2
blastp_uniprot_sprot sp|Q9S9N5|CNGC7_ARATH 71 629 + 559 Gaps:40 77.37 738 53.24 0.0 Putative cyclic nucleotide-gated ion channel 7 OS Arabidopsis thaliana GN CNGC7 PE 3 SV 1
blastp_uniprot_sprot sp|Q9SL29|CNG15_ARATH 72 681 + 610 Gaps:38 90.56 678 50.81 0.0 Putative cyclic nucleotide-gated ion channel 15 OS Arabidopsis thaliana GN CNGC15 PE 3 SV 1

25 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 415 603 189 SSF51206 none none IPR018490
ProSiteProfiles 486 565 80 PS50042 none cAMP/cGMP binding motif profile. IPR000595
PANTHER 72 286 215 PTHR10217:SF465 none none none
Phobius 252 277 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 404 683 280 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 110 128 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 278 381 104 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 89 109 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 614 640 27 PS50096 none IQ motif profile. IPR000048
Phobius 151 251 101 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 136 403 268 PF00520 none Ion transport protein IPR005821
Pfam 511 597 87 PF00027 none Cyclic nucleotide-binding domain IPR000595
Phobius 1 88 88 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SMART 486 612 127 SM00100 none Cyclic nucleotide-monophosphate binding domain IPR000595
Phobius 382 403 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 129 150 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 86 281 196 G3DSA:1.10.287.70 none none none
Gene3D 348 408 61 G3DSA:1.10.287.70 none none none
PANTHER 72 286 215 PTHR10217 none none none
PANTHER 335 648 314 PTHR10217 none none none
Gene3D 484 597 114 G3DSA:2.60.120.10 none none IPR014710
SUPERFAMILY 77 282 206 SSF81324 none none none
SUPERFAMILY 348 408 61 SSF81324 none none none
Gene3D 414 477 64 G3DSA:1.10.287.630 none none none
PANTHER 335 648 314 PTHR10217:SF465 none none none

3 Localization

Analysis Start End Length
TMHMM 256 278 22
TMHMM 378 400 22
TMHMM 89 111 22

0 Qtllist

0 Targeting