Protein : Qrob_P0073220.2 Q. robur
Protein Identifier  ? Qrob_P0073220.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) KOG1418//KOG1419//KOG1420//KOG3713//KOG4404 - Tandem pore domain K+ channel [Inorganic ion transport and metabolism]. // Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism]. // Ca2+-activated K+ channel Slowpoke alpha subunit [Inorganic ion transport and metabolism Signal transduction mechanisms]. // Voltage-gated K+ channel KCNB/KCNC [Inorganic ion transport and metabolism]. // Tandem pore domain K+ channel TASK3/THIK-1 [Inorganic ion transport and metabolism]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 428  
Kegg Orthology  K05389
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0005774 vacuolar membrane The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell.
GO:0071805 potassium ion transmembrane transport A process in which a potassium ion is transported from one side of a membrane to the other.
GO:0005249 voltage-gated potassium channel activity Enables the transmembrane transfer of a potassium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.
GO:0030007 cellular potassium ion homeostasis Any process involved in the maintenance of an internal steady state of potassium ions at the level of a cell.
GO:0005267 potassium channel activity Enables the selective, facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100804249 1 427 + 427 Gaps:9 100.00 430 77.21 0.0 two-pore potassium channel 3-like
blastp_kegg lcl|cam:101497873 1 427 + 427 Gaps:5 100.00 428 79.44 0.0 two-pore potassium channel 3-like
blastp_kegg lcl|csv:101223875 1 427 + 427 Gaps:4 100.00 425 78.35 0.0 two-pore potassium channel 3-like
blastp_kegg lcl|csv:101220017 1 427 + 427 Gaps:4 100.00 425 78.35 0.0 two-pore potassium channel 3-like
blastp_kegg lcl|rcu:RCOM_0634200 1 427 + 427 Gaps:7 100.00 426 76.76 0.0 Calcium-activated outward-rectifying potassium channel putative
blastp_kegg lcl|fve:101311447 1 426 + 426 Gaps:15 100.00 433 76.67 0.0 two-pore potassium channel 3-like
blastp_kegg lcl|mdm:103434967 1 422 + 422 Gaps:11 99.07 429 77.88 0.0 two-pore potassium channel 3-like
blastp_kegg lcl|cmo:103484391 1 427 + 427 Gaps:4 100.00 425 77.18 0.0 two-pore potassium channel 3
blastp_kegg lcl|pop:POPTR_0001s34510g 1 426 + 426 Gaps:10 99.77 433 75.23 0.0 calcium-activated outward-rectifying potassium channel 3 family protein
blastp_kegg lcl|mdm:103446212 1 426 + 426 Gaps:12 100.00 430 75.58 0.0 two-pore potassium channel 3-like
blastp_pdb 3ouf_B 148 217 + 70 Gaps:11 69.07 97 46.27 6e-08 mol:protein length:97 Potassium channel protein
blastp_pdb 3ouf_A 148 217 + 70 Gaps:11 69.07 97 46.27 6e-08 mol:protein length:97 Potassium channel protein
blastp_pdb 3tet_B 148 217 + 70 Gaps:11 69.07 97 44.78 2e-07 mol:protein length:97 Potassium channel protein
blastp_pdb 3tet_A 148 217 + 70 Gaps:11 69.07 97 44.78 2e-07 mol:protein length:97 Potassium channel protein
blastp_pdb 3t4d_B 148 217 + 70 Gaps:11 69.07 97 44.78 2e-07 mol:protein length:97 Potassium channel protein
blastp_pdb 3t4d_A 148 217 + 70 Gaps:11 69.07 97 44.78 2e-07 mol:protein length:97 Potassium channel protein
blastp_pdb 3tcu_B 148 217 + 70 Gaps:11 69.07 97 44.78 2e-07 mol:protein length:97 Potassium channel protein
blastp_pdb 3tcu_A 148 217 + 70 Gaps:11 69.07 97 44.78 2e-07 mol:protein length:97 Potassium channel protein
blastp_pdb 3t1c_B 148 217 + 70 Gaps:11 69.07 97 44.78 2e-07 mol:protein length:97 Potassium channel protein
blastp_pdb 3t1c_A 148 217 + 70 Gaps:11 69.07 97 44.78 2e-07 mol:protein length:97 Potassium channel protein
blastp_uniprot_sprot sp|Q9SVV6|KCO6_ARATH 4 424 + 421 Gaps:18 97.48 436 64.00 0.0 Two-pore potassium channel 3 OS Arabidopsis thaliana GN TPK3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL25|KCO2_ARATH 29 425 + 397 Gaps:23 89.84 443 62.81 5e-167 Two-pore potassium channel 2 OS Arabidopsis thaliana GN TPK2 PE 2 SV 1
blastp_uniprot_sprot sp|Q69TN4|KCO3_ORYSJ 109 427 + 319 Gaps:11 72.37 456 63.33 2e-144 Two pore potassium channel c OS Oryza sativa subsp. japonica GN TPKC PE 3 SV 1
blastp_uniprot_sprot sp|Q9S6Z8|KCO5_ARATH 51 423 + 373 Gaps:23 96.57 408 54.06 1e-137 Two-pore potassium channel 5 OS Arabidopsis thaliana GN TPK5 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FWX6|KCO4_ARATH 129 410 + 282 Gaps:33 93.31 284 47.17 3e-66 Two-pore potassium channel 4 OS Arabidopsis thaliana GN TPK4 PE 2 SV 2
blastp_uniprot_sprot sp|Q8LBL1|KCO1_ARATH 129 423 + 295 Gaps:7 80.44 363 38.36 1e-61 Two-pore potassium channel 1 OS Arabidopsis thaliana GN TPK1 PE 1 SV 2
blastp_uniprot_sprot sp|Q8LIN5|KCO2_ORYSJ 158 422 + 265 Gaps:11 73.35 349 39.45 2e-55 Two pore potassium channel b OS Oryza sativa subsp. japonica GN TPKB PE 1 SV 1
blastp_uniprot_sprot sp|Q850M0|KCO1_ORYSJ 134 422 + 289 Gaps:13 80.69 347 38.57 7e-55 Two pore potassium channel a OS Oryza sativa subsp. japonica GN TPKA PE 1 SV 1
blastp_uniprot_sprot sp|Q9XFR0|KCO3_ARATH 35 422 + 388 Gaps:66 97.69 260 56.69 1e-54 Potassium inward rectifier (Kir)-like channel 3 OS Arabidopsis thaliana GN KCO3 PE 1 SV 1
blastp_uniprot_sprot sp|P40310|TOK1_YEAST 178 328 + 151 Gaps:27 24.31 691 23.81 2e-08 Outward-rectifier potassium channel TOK1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN TOK1 PE 1 SV 1

23 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 321 342 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSitePatterns 371 383 13 PS00018 none EF-hand calcium-binding domain. IPR018247
Phobius 343 427 85 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 193 203 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 158 423 266 PTHR11003:SF88 none none IPR031144
Phobius 1 141 141 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 143 234 92 SSF81324 none none none
Phobius 142 163 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 361 423 63 SSF47473 none none none
PANTHER 158 423 266 PTHR11003 none none none
PRINTS 185 213 29 PR01333 none Two pore domain K+ channel signature IPR003280
PRINTS 305 314 10 PR01333 none Two pore domain K+ channel signature IPR003280
Phobius 164 174 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 265 351 87 G3DSA:1.10.287.70 none none none
Gene3D 142 229 88 G3DSA:1.10.287.70 none none none
Pfam 274 342 69 PF07885 none Ion channel IPR013099
Pfam 148 228 81 PF07885 none Ion channel IPR013099
Phobius 175 192 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 289 320 32 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 267 288 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 258 364 107 SSF81324 none none none
Phobius 230 266 37 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 204 229 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

5 Localization

Analysis Start End Length
TMHMM 141 163 22
TMHMM 207 229 22
TMHMM 320 342 22
TMHMM 175 197 22
TMHMM 267 289 22

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting