Protein : Qrob_P0072780.2 Q. robur
Protein Identifier  ? Qrob_P0072780.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) PTHR12961 - CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 127  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0015031 protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0007030 Golgi organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the Golgi apparatus.

15 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101300816 1 100 + 100 none 13.02 768 73.00 7e-41 conserved oligomeric Golgi complex subunit 2-like
blastp_kegg lcl|pmum:103338049 1 113 + 113 Gaps:2 14.70 755 69.37 1e-40 conserved oligomeric Golgi complex subunit 2
blastp_kegg lcl|tcc:TCM_027410 1 123 + 123 Gaps:9 15.12 754 69.30 3e-40 Golgi organization COG2 isoform 1
blastp_kegg lcl|pper:PRUPE_ppa015080mg 1 100 + 100 Gaps:2 13.65 718 75.51 6e-40 hypothetical protein
blastp_kegg lcl|crb:CARUB_v10004211mg 1 112 + 112 Gaps:1 14.72 754 67.57 8e-40 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1506590 1 123 + 123 Gaps:9 15.08 756 68.42 8e-40 Conserved oligomeric Golgi complex component putative
blastp_kegg lcl|pop:POPTR_0012s09800g 2 123 + 122 Gaps:8 15.10 755 68.42 4e-39 POPTRDRAFT_806538 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10018979mg 1 107 + 107 none 14.13 757 66.36 4e-39 hypothetical protein
blastp_kegg lcl|cit:102607838 1 107 + 107 none 14.13 757 66.36 5e-39 conserved oligomeric Golgi complex subunit 2-like
blastp_kegg lcl|mdm:103437551 6 100 + 95 none 12.58 755 73.68 2e-38 conserved oligomeric Golgi complex subunit 2-like
blastp_uniprot_sprot sp|Q14746|COG2_HUMAN 27 125 + 99 none 13.41 738 28.28 8e-08 Conserved oligomeric Golgi complex subunit 2 OS Homo sapiens GN COG2 PE 1 SV 1
blastp_uniprot_sprot sp|Q921L5|COG2_MOUSE 27 97 + 71 none 9.71 731 32.39 2e-07 Conserved oligomeric Golgi complex subunit 2 OS Mus musculus GN Cog2 PE 2 SV 2
blastp_uniprot_sprot sp|Q54UC2|COG2_DICDI 26 122 + 97 Gaps:8 9.85 904 33.71 8e-06 Conserved oligomeric Golgi complex subunit 2 OS Dictyostelium discoideum GN cog2 PE 3 SV 1
rpsblast_cdd gnl|CDD|148010 27 100 + 74 none 55.64 133 39.19 5e-16 pfam06148 COG2 COG (conserved oligomeric Golgi) complex component COG2. The COG complex comprises eight proteins COG1-8. The COG complex plays critical roles in Golgi structure and function. The proposed function of the complex is to mediate the initial physical contact between transport vesicles and their membrane targets. A comparable role in tethering vesicles has been suggested for at least six additional large multisubunit complexes including the exocyst a complex that mediates trafficking to the plasma membrane. COG2 structure reveals a six-helix bundle with few conserved surface features but a general resemblance to recently determined crystal structures of four different exocyst subunits. These bundles inCOG2 may act as platforms for interaction with other trafficing proteins including SNAREs (soluble N-ethylmaleimide factor attachment protein receptors) and Rabs.
rpsblast_kog gnl|CDD|37518 12 105 + 94 Gaps:3 13.76 705 28.87 3e-25 KOG2307 KOG2307 KOG2307 Low density lipoprotein receptor [Intracellular trafficking secretion and vesicular transport].

2 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 3 100 98 PTHR12961 none none IPR009316
Pfam 27 108 82 PF06148 none COG (conserved oligomeric Golgi) complex component, COG2 IPR024602

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting