Protein : Qrob_P0072720.2 Q. robur
Protein Identifier  ? Qrob_P0072720.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=53) PF00954//PF01453//PF08276 - S-locus glycoprotein family // D-mannose binding lectin // PAN-like domain Code Enzyme  EC:2.7.11.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 413  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

1 GO Terms

Identifier Name Description
GO:0048544 recognition of pollen The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species.

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_046868 19 406 + 388 Gaps:32 43.61 908 46.97 6e-103 S-locus lectin protein kinase family protein putative
blastp_kegg lcl|vvi:100256692 27 405 + 379 Gaps:37 46.71 865 43.56 2e-98 receptor-like serine/threonine-protein kinase SD1-8-like
blastp_kegg lcl|vvi:100267572 27 408 + 382 Gaps:35 45.08 894 41.94 5e-92 receptor-like serine/threonine-protein kinase SD1-8-like
blastp_kegg lcl|vvi:100260532 27 408 + 382 Gaps:35 48.55 830 41.44 1e-89 receptor-like serine/threonine-protein kinase SD1-8-like
blastp_kegg lcl|gmx:100811148 15 406 + 392 Gaps:31 47.12 834 44.02 1e-89 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300-like
blastp_kegg lcl|vvi:100246936 16 408 + 393 Gaps:36 48.43 958 42.89 4e-88 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like
blastp_kegg lcl|tcc:TCM_031277 10 405 + 396 Gaps:83 49.66 1621 37.27 3e-86 Serine/threonine-protein kinase receptor putative
blastp_kegg lcl|pvu:PHAVU_011G149500g 13 406 + 394 Gaps:46 50.69 797 43.32 7e-86 hypothetical protein
blastp_kegg lcl|vvi:100265866 21 405 + 385 Gaps:157 48.64 1988 35.99 2e-84 uncharacterized LOC100265866
blastp_kegg lcl|vvi:100245158 27 408 + 382 Gaps:116 52.35 1658 40.67 1e-83 uncharacterized LOC100245158
blastp_uniprot_sprot sp|O64477|Y2913_ARATH 5 409 + 405 Gaps:56 51.81 828 36.60 1e-69 G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS Arabidopsis thaliana GN At2g19130 PE 2 SV 1
blastp_uniprot_sprot sp|O64781|Y1639_ARATH 8 406 + 399 Gaps:51 50.54 831 35.48 2e-62 G-type lectin S-receptor-like serine/threonine-protein kinase At1g61390 OS Arabidopsis thaliana GN At1g61390 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SXB4|Y1130_ARATH 39 411 + 373 Gaps:51 48.78 820 34.00 2e-62 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 OS Arabidopsis thaliana GN At1g11300 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SXB3|Y1112_ARATH 39 406 + 368 Gaps:47 47.93 820 34.61 4e-59 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11280 OS Arabidopsis thaliana GN At1g11280 PE 2 SV 1
blastp_uniprot_sprot sp|O64770|Y1649_ARATH 39 405 + 367 Gaps:40 48.13 804 33.59 2e-58 G-type lectin S-receptor-like serine/threonine-protein kinase At1g61490 OS Arabidopsis thaliana GN At1g61490 PE 3 SV 1
blastp_uniprot_sprot sp|O64771|Y1148_ARATH 39 405 + 367 Gaps:44 47.84 809 35.14 2e-58 G-type lectin S-receptor-like serine/threonine-protein kinase At1g61480 OS Arabidopsis thaliana GN At1g61480 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SY95|Y1155_ARATH 32 411 + 380 Gaps:40 49.88 802 34.25 3e-58 G-type lectin S-receptor-like serine/threonine-protein kinase At1g61550 OS Arabidopsis thaliana GN At1g61550 PE 2 SV 1
blastp_uniprot_sprot sp|O64782|SD129_ARATH 8 411 + 404 Gaps:53 52.55 805 34.28 4e-58 G-type lectin S-receptor-like serine/threonine-protein kinase SD1-29 OS Arabidopsis thaliana GN SD129 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LPZ9|SD113_ARATH 28 411 + 384 Gaps:56 49.88 830 34.78 5e-58 G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 OS Arabidopsis thaliana GN SD113 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SXB5|Y1135_ARATH 38 411 + 374 Gaps:55 48.90 820 32.92 1e-57 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11305 OS Arabidopsis thaliana GN At1g11305 PE 3 SV 1
rpsblast_cdd gnl|CDD|28910 38 151 + 114 Gaps:4 98.28 116 48.25 5e-21 cd00028 B_lectin Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes such as cell-cell and host-pathogen interactions serum glycoprotein turnover and innate immune responses..
rpsblast_cdd gnl|CDD|201803 76 177 + 102 Gaps:7 100.00 109 44.95 7e-21 pfam01453 B_lectin D-mannose binding lectin. These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria.
rpsblast_cdd gnl|CDD|128418 39 150 + 112 Gaps:7 97.37 114 49.55 7e-21 smart00108 B_lectin Bulb-type mannose-specific lectin.
rpsblast_cdd gnl|CDD|29032 309 401 + 93 Gaps:9 100.00 84 47.62 3e-13 cd01098 PAN_AP_plant Plant PAN/APPLE-like domain present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica one of probably many molecular mechanisms by which hermaphrodite flowering plants avoid self-fertilization..
rpsblast_cdd gnl|CDD|203897 321 383 + 63 Gaps:4 95.45 66 39.68 1e-12 pfam08276 PAN_2 PAN-like domain.
rpsblast_cdd gnl|CDD|201524 201 292 + 92 Gaps:7 82.73 110 27.47 3e-10 pfam00954 S_locus_glycop S-locus glycoprotein family. In Brassicaceae self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins as well as S-receptor kinases are in linkage with the S-alleles.

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 220 291 72 PF00954 none S-locus glycoprotein family IPR000858
SMART 36 151 116 SM00108 none Bulb-type mannose-specific lectin IPR001480
Phobius 8 19 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 30 156 127 G3DSA:2.90.10.10 none none IPR001480
Pfam 77 176 100 PF01453 none D-mannose binding lectin IPR001480
ProSiteProfiles 30 149 120 PS50927 none Bulb-type lectin domain profile. IPR001480
ProSiteProfiles 313 401 89 PS50948 none PAN/Apple domain profile. IPR003609
Phobius 20 24 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
SMART 319 400 82 SM00473 none divergent subfamily of APPLE domains IPR003609
Phobius 1 7 7 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SUPERFAMILY 330 384 55 SSF57414 none none none
SUPERFAMILY 65 204 140 SSF51110 none none IPR001480
Pfam 320 383 64 PF08276 none PAN-like domain IPR013227
Phobius 1 24 24 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 25 412 388 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

2 Localization

Analysis Start End Length
SignalP_EUK 1 21 20
TMHMM 5 24 19

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 24   Secretory pathway 1 0.942 0.024 NON-PLANT 24