Protein : Qrob_P0072560.2 Q. robur
Protein Identifier  ? Qrob_P0072560.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=6) PF00954//PF08276 - S-locus glycoprotein family // PAN-like domain Code Enzyme  EC:2.7.11.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 237  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0048544 recognition of pollen The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_031280 4 221 + 218 Gaps:23 25.39 768 59.49 1e-69 S-locus lectin protein kinase family protein putative
blastp_kegg lcl|tcc:TCM_031282 1 223 + 223 Gaps:85 23.24 2216 40.58 1e-69 Serine/threonine kinases protein kinases ATP binding sugar binding kinases carbohydrate binding putative isoform 1
blastp_kegg lcl|pper:PRUPE_ppa015608mg 2 222 + 221 Gaps:33 30.11 817 49.59 2e-67 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa017572mg 2 222 + 221 Gaps:30 29.82 815 47.74 3e-65 hypothetical protein
blastp_kegg lcl|vvi:100265866 2 226 + 225 Gaps:81 31.29 1988 44.05 7e-65 uncharacterized LOC100265866
blastp_kegg lcl|pmum:103326298 2 222 + 221 Gaps:30 30.38 800 46.91 2e-63 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290
blastp_kegg lcl|tcc:TCM_033569 4 221 + 218 Gaps:26 36.59 656 47.50 2e-63 Receptor kinase 3 putative
blastp_kegg lcl|pxb:103946541 3 221 + 219 Gaps:19 29.35 811 45.80 5e-61 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290
blastp_kegg lcl|fve:101296759 2 225 + 224 Gaps:70 15.43 3273 40.99 6e-61 uncharacterized protein LOC101296759
blastp_kegg lcl|pop:POPTR_0011s12830g 7 223 + 217 Gaps:10 28.30 802 46.70 2e-57 POPTRDRAFT_771893 hypothetical protein
blastp_uniprot_sprot sp|O81905|SD18_ARATH 1 223 + 223 Gaps:47 31.29 850 35.71 1e-46 Receptor-like serine/threonine-protein kinase SD1-8 OS Arabidopsis thaliana GN SD18 PE 1 SV 1
blastp_uniprot_sprot sp|O81832|Y4729_ARATH 16 221 + 206 Gaps:15 24.65 783 45.60 3e-45 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS Arabidopsis thaliana GN At4g27290 PE 3 SV 4
blastp_uniprot_sprot sp|Q9S972|SD16_ARATH 1 221 + 221 Gaps:47 30.93 847 35.50 3e-42 Receptor-like serine/threonine-protein kinase SD1-6 OS Arabidopsis thaliana GN SD16 PE 1 SV 2
blastp_uniprot_sprot sp|O81833|SD11_ARATH 6 223 + 218 Gaps:25 29.33 815 35.98 1e-41 G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 OS Arabidopsis thaliana GN SD11 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZT07|RKS1_ARATH 6 221 + 216 Gaps:48 31.21 833 35.77 3e-40 G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS Arabidopsis thaliana GN RKS1 PE 3 SV 3
blastp_uniprot_sprot sp|Q09092|SRK6_BRAOE 19 221 + 203 Gaps:44 28.59 857 35.10 1e-38 Putative serine/threonine-protein kinase receptor OS Brassica oleracea var. acephala GN SRK6 PE 2 SV 2
blastp_uniprot_sprot sp|Q39086|SD17_ARATH 1 221 + 221 Gaps:46 31.20 843 33.84 8e-38 Receptor-like serine/threonine-protein kinase SD1-7 OS Arabidopsis thaliana GN SD17 PE 1 SV 1
blastp_uniprot_sprot sp|P0DH87|PSRK_ARATH 6 221 + 216 Gaps:46 46.89 546 36.72 4e-37 Putative inactive G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS Arabidopsis thaliana GN PSEUDOSRKA PE 5 SV 1
blastp_uniprot_sprot sp|P0DH86|SRK_ARATH 6 221 + 216 Gaps:46 30.01 853 36.72 2e-36 G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS Arabidopsis thaliana GN SRK PE 2 SV 1
blastp_uniprot_sprot sp|P17840|SLSG3_BRAOL 3 157 + 155 Gaps:3 34.94 435 44.08 5e-35 S-locus-specific glycoprotein S13 OS Brassica oleracea GN SLSG PE 2 SV 2
rpsblast_cdd gnl|CDD|203897 69 135 + 67 Gaps:1 100.00 66 53.03 1e-20 pfam08276 PAN_2 PAN-like domain.
rpsblast_cdd gnl|CDD|29032 65 152 + 88 Gaps:10 100.00 84 50.00 3e-15 cd01098 PAN_AP_plant Plant PAN/APPLE-like domain present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica one of probably many molecular mechanisms by which hermaphrodite flowering plants avoid self-fertilization..

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 69 152 84 PS50948 none PAN/Apple domain profile. IPR003609
Pfam 69 135 67 PF08276 none PAN-like domain IPR013227
SMART 70 151 82 SM00473 none divergent subfamily of APPLE domains IPR003609
SUPERFAMILY 188 225 38 SSF56112 none none IPR011009
Pfam 3 48 46 PF00954 none S-locus glycoprotein family IPR000858
PANTHER 9 48 40 PTHR24420:SF659 none none none
PANTHER 139 221 83 PTHR24420:SF659 none none none
PANTHER 9 48 40 PTHR24420 none none none
PANTHER 139 221 83 PTHR24420 none none none
Gene3D 192 224 33 G3DSA:3.30.200.20 none none none

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting