Protein : Qrob_P0071320.2 Q. robur
Protein Identifier  ? Qrob_P0071320.2 Organism . Name  Quercus robur
Score  84.2 Score Type  egn
Protein Description  (M=1) K08516 - synaptobrevin homolog YKT6 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 201  
Kegg Orthology  K08516
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_037091 1 154 + 154 none 77.39 199 90.91 2e-103 SNARE-like superfamily protein
blastp_kegg lcl|pop:POPTR_0006s20190g 1 154 + 154 none 77.39 199 89.61 2e-102 POPTRDRAFT_561300 putative SNARE family protein
blastp_kegg lcl|vvi:100853418 1 154 + 154 none 77.39 199 89.61 3e-102 VAMP-like protein YKT61-like
blastp_kegg lcl|rcu:RCOM_0700610 1 154 + 154 none 77.39 199 90.91 3e-102 snare protein ykt6 putative
blastp_kegg lcl|cmo:103487367 1 154 + 154 none 77.39 199 87.01 8e-100 VAMP-like protein YKT61
blastp_kegg lcl|sot:102596849 1 154 + 154 none 77.39 199 87.66 2e-99 VAMP-like protein YKT61-like
blastp_kegg lcl|cic:CICLE_v10009544mg 1 154 + 154 none 77.39 199 85.71 2e-99 hypothetical protein
blastp_kegg lcl|pop:POPTR_0018s11900g 1 154 + 154 none 77.39 199 87.01 3e-99 POPTRDRAFT_738036 putative SNARE family protein
blastp_kegg lcl|cit:102628823 1 154 + 154 none 77.39 199 85.71 8e-99 VAMP-like protein YKT61-like
blastp_kegg lcl|sly:101259553 1 154 + 154 none 77.39 199 87.01 9e-99 VAMP-like protein YKT61-like
blastp_pdb 3bw6_A 1 138 + 138 Gaps:11 96.53 144 41.01 9e-26 mol:protein length:144 Synaptobrevin homolog YKT6
blastp_pdb 1iou_A 1 138 + 138 Gaps:11 99.29 140 40.29 2e-25 mol:protein length:140 YKT6P
blastp_pdb 1h8m_A 1 138 + 138 Gaps:11 99.29 140 40.29 2e-25 mol:protein length:140 SYNAPTOBREVIN HOMOLOG 1
blastp_pdb 3kyq_A 1 154 + 154 Gaps:5 76.88 199 41.83 2e-21 mol:protein length:199 Synaptobrevin homolog YKT6
blastp_uniprot_sprot sp|Q9ZRD6|YKT61_ARATH 1 154 + 154 none 77.39 199 86.36 2e-99 VAMP-like protein YKT61 OS Arabidopsis thaliana GN YKT61 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LVM9|YKT62_ARATH 1 154 + 154 Gaps:4 77.39 199 77.27 2e-81 VAMP-like protein YKT62 OS Arabidopsis thaliana GN YKT62 PE 2 SV 1
blastp_uniprot_sprot sp|Q6FW27|YKT6_CANGA 21 154 + 134 Gaps:3 66.83 205 47.45 9e-35 Synaptobrevin homolog YKT6 OS Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN YKT6 PE 3 SV 1
blastp_uniprot_sprot sp|P36015|YKT6_YEAST 15 154 + 140 Gaps:9 71.50 200 44.76 3e-33 Synaptobrevin homolog YKT6 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN YKT6 PE 1 SV 1
blastp_uniprot_sprot sp|Q757A4|YKT6_ASHGO 1 162 + 162 Gaps:6 82.00 200 41.46 4e-33 Synaptobrevin homolog YKT6 OS Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN YKT6 PE 3 SV 1
blastp_uniprot_sprot sp|Q6CSA2|YKT6_KLULA 1 154 + 154 Gaps:5 77.50 200 43.87 7e-32 Synaptobrevin homolog YKT6 OS Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN YKT6 PE 3 SV 1
blastp_uniprot_sprot sp|Q6C537|YKT6_YARLI 1 154 + 154 Gaps:5 77.50 200 41.94 4e-31 Synaptobrevin homolog YKT6 OS Yarrowia lipolytica (strain CLIB 122 / E 150) GN YKT6 PE 3 SV 1
blastp_uniprot_sprot sp|Q6BSL0|YKT6_DEBHA 1 162 + 162 Gaps:14 82.00 200 38.41 6e-29 Synaptobrevin homolog YKT6 OS Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN YKT6 PE 3 SV 1
blastp_uniprot_sprot sp|O60073|YKT6_SCHPO 1 154 + 154 Gaps:8 77.16 197 44.74 1e-27 Synaptobrevin homolog ykt6 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN ykt6 PE 3 SV 1
blastp_uniprot_sprot sp|Q3T000|YKT6_BOVIN 1 154 + 154 Gaps:5 77.27 198 43.14 2e-22 Synaptobrevin homolog YKT6 OS Bos taurus GN YKT6 PE 2 SV 1
rpsblast_cdd gnl|CDD|205947 45 126 + 82 Gaps:3 98.78 82 33.33 9e-15 pfam13774 Longin Regulated-SNARE-like domain. Longin is one of the approximately 26 components required for transporting proteins from the ER to the plasma membrane via the Golgi apparatus. It is necessary for the steps of the transfer from the ER to the Golgi complex. Longins are the only R-SNAREs that are common to all eukaryotes and they are characterized by a conserved N-terminal domain with a profilin-like fold called a longin domain.
rpsblast_cdd gnl|CDD|34744 1 154 + 154 Gaps:17 76.32 190 31.72 3e-14 COG5143 SNC1 Synaptobrevin/VAMP-like protein [Intracellular trafficking and secretion].
rpsblast_kog gnl|CDD|36079 1 154 + 154 Gaps:5 77.27 198 56.21 5e-57 KOG0861 KOG0861 KOG0861 SNARE protein YKT6 synaptobrevin/VAMP syperfamily [Intracellular trafficking secretion and vesicular transport].

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 151 151 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 1 139 139 SSF64356 none none IPR011012
ProSiteProfiles 7 123 117 PS50859 none Longin domain profile. IPR010908
PANTHER 26 155 130 PTHR21136:SF5 none none none
Phobius 196 200 5 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 152 169 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 1 139 139 G3DSA:3.30.450.50 none none IPR010908
Phobius 175 195 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 45 114 70 PF13774 none Regulated-SNARE-like domain IPR010908
PANTHER 26 155 130 PTHR21136 none none none
Phobius 170 174 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

0 Localization

0 Qtllist

0 Targeting