Protein : Qrob_P0070760.2 Q. robur
Protein Identifier  ? Qrob_P0070760.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) K13431 - signal recognition particle receptor subunit alpha Gene Prediction Quality  validated
Protein length 

Sequence

Length: 622  
Kegg Orthology  K13431
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0006614 SRP-dependent cotranslational protein targeting to membrane The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane.
GO:0003924 GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO:0005047 signal recognition particle binding Interacting selectively and non-covalently with the signal recognition particle.
GO:0005785 signal recognition particle receptor complex A transmembrane heterodimeric protein located in the membrane of the rough endoplasmic reticulum. Both subunits contain GTPase domains with which signal recognition particle interacts. In the presence of GTP and SRP receptor, SRP is released from the ribosome-nascent chain complex.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103949062 1 621 + 621 Gaps:8 100.00 621 87.28 0.0 signal recognition particle receptor subunit alpha homolog
blastp_kegg lcl|pmum:103341280 1 621 + 621 Gaps:7 100.00 626 86.26 0.0 signal recognition particle receptor subunit alpha homolog
blastp_kegg lcl|mdm:103415545 1 621 + 621 Gaps:8 100.00 621 87.12 0.0 signal recognition particle receptor subunit alpha-like
blastp_kegg lcl|pper:PRUPE_ppa002859mg 1 621 + 621 Gaps:7 100.00 626 85.62 0.0 hypothetical protein
blastp_kegg lcl|cmo:103493693 1 621 + 621 Gaps:6 100.00 617 85.90 0.0 signal recognition particle receptor subunit alpha homolog
blastp_kegg lcl|cic:CICLE_v10007753mg 1 621 + 621 Gaps:2 100.00 621 85.67 0.0 hypothetical protein
blastp_kegg lcl|cit:102611068 1 621 + 621 Gaps:2 100.00 621 85.67 0.0 signal recognition particle receptor subunit alpha-like
blastp_kegg lcl|csv:101217753 1 621 + 621 Gaps:6 100.00 617 85.58 0.0 signal recognition particle receptor subunit alpha homolog
blastp_kegg lcl|pxb:103955991 1 621 + 621 Gaps:8 100.00 621 86.80 0.0 signal recognition particle receptor subunit alpha homolog
blastp_kegg lcl|mdm:103426559 1 621 + 621 Gaps:8 100.00 621 86.47 0.0 signal recognition particle receptor subunit alpha-like
blastp_pdb 3e70_C 330 608 + 279 Gaps:14 80.79 328 45.66 2e-67 mol:protein length:328 Signal recognition particle receptor
blastp_pdb 3dmd_C 330 608 + 279 Gaps:14 80.79 328 45.66 2e-67 mol:protein length:328 Signal recognition particle receptor
blastp_pdb 3dmd_A 330 608 + 279 Gaps:14 80.79 328 45.66 2e-67 mol:protein length:328 Signal recognition particle receptor
blastp_pdb 3dmd_B 330 608 + 279 Gaps:14 80.79 328 45.66 2e-67 mol:protein length:328 Signal recognition particle receptor
blastp_pdb 3dm9_B 330 608 + 279 Gaps:14 80.79 328 45.66 2e-67 mol:protein length:328 Signal recognition particle receptor
blastp_pdb 1ry1_U 324 620 + 297 Gaps:20 93.58 296 30.69 7e-31 mol:protein length:296 Signal recognition particle protein
blastp_pdb 1jpn_A 324 620 + 297 Gaps:20 93.58 296 30.69 7e-31 mol:protein length:296 SIGNAL RECOGNITION PARTICLE PROTEIN
blastp_pdb 1jpn_B 324 620 + 297 Gaps:20 93.58 296 30.69 7e-31 mol:protein length:296 SIGNAL RECOGNITION PARTICLE PROTEIN
blastp_pdb 1jpj_A 324 620 + 297 Gaps:20 93.58 296 30.69 7e-31 mol:protein length:296 SIGNAL RECOGNITION PARTICLE PROTEIN
blastp_pdb 1ls1_A 324 602 + 279 Gaps:20 87.80 295 32.05 8e-31 mol:protein length:295 SIGNAL RECOGNITION PARTICLE PROTEIN
blastp_uniprot_sprot sp|Q9U5L1|SRPR_DROME 1 621 + 621 Gaps:53 100.00 614 44.95 8e-148 Signal recognition particle receptor subunit alpha homolog OS Drosophila melanogaster GN Gtp-bp PE 1 SV 2
blastp_uniprot_sprot sp|Q9DBG7|SRPR_MOUSE 1 621 + 621 Gaps:44 99.84 636 42.68 4e-147 Signal recognition particle receptor subunit alpha OS Mus musculus GN Srpr PE 1 SV 1
blastp_uniprot_sprot sp|Q3MHE8|SRPR_BOVIN 1 621 + 621 Gaps:103 99.84 639 43.10 3e-142 Signal recognition particle receptor subunit alpha OS Bos taurus GN SRPR PE 2 SV 1
blastp_uniprot_sprot sp|P08240|SRPR_HUMAN 294 621 + 328 Gaps:16 53.92 638 55.52 8e-124 Signal recognition particle receptor subunit alpha OS Homo sapiens GN SRPR PE 1 SV 2
blastp_uniprot_sprot sp|P06625|SRPR_CANFA 294 621 + 328 Gaps:16 53.92 638 54.94 3e-123 Signal recognition particle receptor subunit alpha OS Canis familiaris GN SRPR PE 2 SV 2
blastp_uniprot_sprot sp|Q54ZR7|SRPR_DICDI 317 620 + 304 Gaps:3 49.59 615 59.67 2e-120 Signal recognition particle receptor subunit alpha OS Dictyostelium discoideum GN srpr PE 3 SV 1
blastp_uniprot_sprot sp|O43032|SRPR_SCHPO 1 621 + 621 Gaps:108 100.00 547 35.28 1e-78 Signal recognition particle receptor subunit alpha homolog OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN srp101 PE 3 SV 1
blastp_uniprot_sprot sp|P32916|SRPR_YEAST 186 620 + 435 Gaps:66 73.27 621 37.36 2e-71 Signal recognition particle receptor subunit alpha homolog OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN SRP101 PE 1 SV 2
blastp_uniprot_sprot sp|Q57739|FTSY_METJA 334 620 + 287 Gaps:12 67.24 409 44.73 7e-58 Signal recognition particle receptor FtsY OS Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN ftsY PE 3 SV 1
blastp_uniprot_sprot sp|Q8TIN7|FTSY_METAC 330 620 + 291 Gaps:19 66.19 417 41.30 6e-52 Signal recognition particle receptor FtsY OS Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN ftsY PE 3 SV 1

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 1 123 123 SSF64356 none none IPR011012
SUPERFAMILY 315 396 82 SSF47364 "Reactome:REACT_15380" none IPR013822
SMART 414 560 147 SM00382 none ATPases associated with a variety of cellular activities IPR003593
SMART 415 621 207 SM00962 "Reactome:REACT_15380" SRP54-type protein, GTPase domain IPR000897
Gene3D 316 396 81 G3DSA:1.20.120.140 none none none
ProSitePatterns 594 607 14 PS00300 "Reactome:REACT_15380" SRP54-type proteins GTP-binding domain signature. IPR000897
Pfam 315 378 64 PF02881 "Reactome:REACT_15380" SRP54-type protein, helical bundle domain IPR013822
PANTHER 62 621 560 PTHR11564:SF16 none none none
SMART 312 394 83 SM00963 "Reactome:REACT_15380" SRP54-type protein, helical bundle domain IPR013822
Pfam 28 300 273 PF04086 none Signal recognition particle, alpha subunit, N-terminal IPR007222
PANTHER 62 621 560 PTHR11564 none none none
Gene3D 411 620 210 G3DSA:3.40.50.300 none none IPR027417
Coils 110 131 22 Coil none none none
SUPERFAMILY 411 620 210 SSF52540 none none IPR027417
Pfam 416 620 205 PF00448 "Reactome:REACT_15380" SRP54-type protein, GTPase domain IPR000897

0 Localization

0 Qtllist

0 Targeting