Protein : Qrob_P0070310.2 Q. robur
Protein Identifier  ? Qrob_P0070310.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=82) PF00190 - Cupin Gene Prediction Quality  validated
Protein length 

Sequence

Length: 223  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0045735 nutrient reservoir activity Functions in the storage of nutritious substrates.
GO:0030145 manganese ion binding Interacting selectively and non-covalently with manganese (Mn) ions.

28 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103338264 1 221 + 221 Gaps:5 98.67 225 68.47 1e-101 germin-like protein subfamily T member 2
blastp_kegg lcl|rcu:RCOM_1512950 5 222 + 218 Gaps:5 99.55 220 66.21 2e-100 Rhicadhesin receptor precursor putative (EC:1.15.1.1)
blastp_kegg lcl|tcc:TCM_045749 9 222 + 214 Gaps:6 80.61 263 69.81 8e-100 Germin-like protein subfamily T member 2
blastp_kegg lcl|cic:CICLE_v10027191mg 27 222 + 196 Gaps:3 88.24 221 72.82 8e-100 hypothetical protein
blastp_kegg lcl|cit:102611719 27 222 + 196 Gaps:3 88.24 221 72.82 8e-100 germin-like protein subfamily T member 2-like
blastp_kegg lcl|pper:PRUPE_ppa011491mg 18 221 + 204 Gaps:4 98.08 208 70.10 4e-98 hypothetical protein
blastp_kegg lcl|fve:101315342 1 221 + 221 Gaps:5 99.55 223 64.86 3e-97 germin-like protein subfamily T member 2-like
blastp_kegg lcl|mdm:103455273 27 221 + 195 Gaps:4 89.45 218 70.77 4e-95 germin-like protein subfamily T member 2
blastp_kegg lcl|pop:POPTR_0015s07940g 27 222 + 196 Gaps:4 89.09 220 68.88 1e-94 POPTRDRAFT_901916 hypothetical protein
blastp_kegg lcl|sot:102579614 8 222 + 215 Gaps:5 98.18 220 64.35 3e-92 germin-like protein subfamily T member 2-like
blastp_pdb 2ete_B 28 220 + 193 Gaps:8 98.01 201 53.30 2e-64 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2ete_A 28 220 + 193 Gaps:8 98.01 201 53.30 2e-64 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2et1_A 29 220 + 192 Gaps:8 97.51 201 53.57 4e-64 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 1fi2_A 29 220 + 192 Gaps:8 97.51 201 53.57 4e-64 mol:protein length:201 OXALATE OXIDASE
blastp_pdb 2et7_A 28 220 + 193 Gaps:8 98.01 201 52.79 3e-63 mol:protein length:201 Oxalate oxidase 1
blastp_uniprot_sprot sp|Q9LMC9|GLT2_ARATH 13 220 + 208 Gaps:4 93.64 220 63.11 2e-85 Germin-like protein subfamily T member 2 OS Arabidopsis thaliana GN At1g18980 PE 2 SV 1
blastp_uniprot_sprot sp|P92995|GLT1_ARATH 11 220 + 210 Gaps:4 94.55 220 62.02 3e-83 Germin-like protein subfamily T member 1 OS Arabidopsis thaliana GN GLP1 PE 2 SV 2
blastp_uniprot_sprot sp|P45851|OXO2_HORVU 11 222 + 212 Gaps:8 96.43 224 51.39 2e-66 Oxalate oxidase 2 OS Hordeum vulgare PE 2 SV 1
blastp_uniprot_sprot sp|P94014|GL21_ARATH 25 220 + 196 Gaps:2 89.50 219 52.04 3e-66 Germin-like protein subfamily 2 member 1 OS Arabidopsis thaliana GN GLP4 PE 2 SV 2
blastp_uniprot_sprot sp|Q10BU2|GL37_ORYSJ 7 220 + 214 Gaps:6 93.56 233 51.38 3e-66 Germin-like protein 3-7 OS Oryza sativa subsp. japonica GN GER7 PE 2 SV 1
blastp_uniprot_sprot sp|Q851K1|GL36_ORYSJ 15 220 + 206 Gaps:8 92.58 229 50.47 4e-66 Germin-like protein 3-6 OS Oryza sativa subsp. japonica GN Os03g0694000 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FZ27|GL22_ARATH 1 222 + 222 Gaps:9 99.09 219 47.00 4e-66 Germin-like protein subfamily 2 member 2 OS Arabidopsis thaliana GN At1g02335 PE 2 SV 1
blastp_uniprot_sprot sp|Q851K0|GL35_ORYSJ 15 220 + 206 Gaps:8 93.39 227 50.47 6e-66 Germin-like protein 3-5 OS Oryza sativa subsp. japonica GN Os03g0693900 PE 2 SV 1
blastp_uniprot_sprot sp|P15290|GER2_WHEAT 11 222 + 212 Gaps:8 96.43 224 50.93 8e-66 Oxalate oxidase GF-2.8 OS Triticum aestivum PE 1 SV 1
blastp_uniprot_sprot sp|Q851J9|GL34_ORYSJ 17 220 + 204 Gaps:8 91.70 229 50.95 9e-66 Putative germin-like protein 3-4 OS Oryza sativa subsp. japonica GN Os03g0693800 PE 3 SV 1
rpsblast_cdd gnl|CDD|197904 75 208 + 134 Gaps:2 91.78 146 38.06 2e-27 smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
rpsblast_cdd gnl|CDD|201069 76 208 + 133 Gaps:16 88.49 139 33.33 3e-23 pfam00190 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
rpsblast_cdd gnl|CDD|32101 90 170 + 81 Gaps:5 58.02 131 27.63 4e-07 COG1917 COG1917 Uncharacterized conserved protein contains double-stranded beta-helix domain [Function unknown].

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 220 220 PTHR31238 none none none
Phobius 1 28 28 SIGNAL_PEPTIDE none Signal peptide region none
Gene3D 28 220 193 G3DSA:2.60.120.10 none none IPR014710
PANTHER 1 220 220 PTHR31238:SF7 none none none
Phobius 29 222 194 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 29 219 191 SSF51182 none none IPR011051
SMART 65 214 150 SM00835 none Cupin IPR006045
PRINTS 114 134 21 PR00325 none Germin signature IPR001929
PRINTS 144 164 21 PR00325 none Germin signature IPR001929
PRINTS 177 192 16 PR00325 none Germin signature IPR001929
Phobius 22 28 7 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 79 210 132 PF00190 none Cupin IPR006045
Phobius 8 21 14 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 7 7 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none

4 Localization

Analysis Start End Length
SignalP_GRAM_NEGATIVE 1 28 27
SignalP_GRAM_POSITIVE 1 28 27
TMHMM 7 26 19
SignalP_EUK 1 28 27

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 28   Secretory pathway 1 0.980 0.018 NON-PLANT 28