Protein : Qrob_P0070290.2 Q. robur
Protein Identifier  ? Qrob_P0070290.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=82) PF00190 - Cupin Gene Prediction Quality  validated
Protein length 

Sequence

Length: 223  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0045735 nutrient reservoir activity Functions in the storage of nutritious substrates.
GO:0030145 manganese ion binding Interacting selectively and non-covalently with manganese (Mn) ions.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1512950 4 222 + 219 Gaps:4 99.55 220 66.21 3e-99 Rhicadhesin receptor precursor putative (EC:1.15.1.1)
blastp_kegg lcl|pmum:103338264 1 221 + 221 Gaps:5 98.67 225 66.22 2e-97 germin-like protein subfamily T member 2
blastp_kegg lcl|tcc:TCM_045749 1 222 + 222 Gaps:8 84.41 263 66.67 9e-96 Germin-like protein subfamily T member 2
blastp_kegg lcl|cic:CICLE_v10027191mg 27 222 + 196 Gaps:3 88.24 221 70.26 2e-95 hypothetical protein
blastp_kegg lcl|cit:102611719 27 222 + 196 Gaps:3 88.24 221 70.26 2e-95 germin-like protein subfamily T member 2-like
blastp_kegg lcl|pper:PRUPE_ppa011491mg 15 221 + 207 Gaps:4 99.52 208 67.63 4e-95 hypothetical protein
blastp_kegg lcl|fve:101315342 1 221 + 221 Gaps:5 99.55 223 62.61 2e-92 germin-like protein subfamily T member 2-like
blastp_kegg lcl|sly:101264308 15 222 + 208 Gaps:5 96.31 217 66.51 1e-91 germin-like protein subfamily T member 2-like
blastp_kegg lcl|sot:102579614 9 222 + 214 Gaps:5 97.73 220 65.12 2e-91 germin-like protein subfamily T member 2-like
blastp_kegg lcl|pop:POPTR_0015s07940g 27 222 + 196 Gaps:4 89.09 220 66.84 2e-90 POPTRDRAFT_901916 hypothetical protein
blastp_pdb 2ete_B 28 220 + 193 Gaps:8 98.01 201 52.79 1e-63 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2ete_A 28 220 + 193 Gaps:8 98.01 201 52.79 1e-63 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2et1_A 29 220 + 192 Gaps:8 97.51 201 53.06 2e-63 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 1fi2_A 29 220 + 192 Gaps:8 97.51 201 53.06 2e-63 mol:protein length:201 OXALATE OXIDASE
blastp_pdb 2et7_A 28 220 + 193 Gaps:8 98.01 201 52.28 1e-62 mol:protein length:201 Oxalate oxidase 1
blastp_uniprot_sprot sp|P92995|GLT1_ARATH 11 221 + 211 Gaps:4 95.00 220 61.24 3e-82 Germin-like protein subfamily T member 1 OS Arabidopsis thaliana GN GLP1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LMC9|GLT2_ARATH 13 221 + 209 Gaps:4 94.09 220 60.87 8e-82 Germin-like protein subfamily T member 2 OS Arabidopsis thaliana GN At1g18980 PE 2 SV 1
blastp_uniprot_sprot sp|Q851K0|GL35_ORYSJ 11 220 + 210 Gaps:6 94.27 227 50.00 3e-66 Germin-like protein 3-5 OS Oryza sativa subsp. japonica GN Os03g0693900 PE 2 SV 1
blastp_uniprot_sprot sp|P45851|OXO2_HORVU 11 222 + 212 Gaps:8 96.43 224 50.93 6e-66 Oxalate oxidase 2 OS Hordeum vulgare PE 2 SV 1
blastp_uniprot_sprot sp|Q9FZ27|GL22_ARATH 1 222 + 222 Gaps:9 99.09 219 46.54 1e-65 Germin-like protein subfamily 2 member 2 OS Arabidopsis thaliana GN At1g02335 PE 2 SV 1
blastp_uniprot_sprot sp|P94014|GL21_ARATH 25 220 + 196 Gaps:2 89.50 219 52.55 1e-65 Germin-like protein subfamily 2 member 1 OS Arabidopsis thaliana GN GLP4 PE 2 SV 2
blastp_uniprot_sprot sp|Q10BU2|GL37_ORYSJ 5 220 + 216 Gaps:8 93.56 233 50.46 1e-65 Germin-like protein 3-7 OS Oryza sativa subsp. japonica GN GER7 PE 2 SV 1
blastp_uniprot_sprot sp|Q75HJ4|GL38_ORYSJ 1 220 + 220 Gaps:11 100.00 225 47.56 2e-65 Germin-like protein 3-8 OS Oryza sativa subsp. japonica GN Os03g0804700 PE 2 SV 1
blastp_uniprot_sprot sp|Q851K1|GL36_ORYSJ 15 220 + 206 Gaps:6 91.70 229 50.00 3e-65 Germin-like protein 3-6 OS Oryza sativa subsp. japonica GN Os03g0694000 PE 2 SV 1
blastp_uniprot_sprot sp|Q851J9|GL34_ORYSJ 14 220 + 207 Gaps:6 92.14 229 49.76 3e-65 Putative germin-like protein 3-4 OS Oryza sativa subsp. japonica GN Os03g0693800 PE 3 SV 1
rpsblast_cdd gnl|CDD|197904 75 210 + 136 Gaps:2 93.15 146 38.97 4e-28 smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
rpsblast_cdd gnl|CDD|201069 76 209 + 134 Gaps:16 89.21 139 35.48 6e-24 pfam00190 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 10 10 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 28 222 195 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 9 220 212 PTHR31238 none none none
ProSitePatterns 109 122 14 PS00725 none Germin family signature. IPR019780
PRINTS 177 192 16 PR00325 none Germin signature IPR001929
PRINTS 114 134 21 PR00325 none Germin signature IPR001929
PRINTS 144 164 21 PR00325 none Germin signature IPR001929
SUPERFAMILY 29 219 191 SSF51182 none none IPR011051
PANTHER 9 220 212 PTHR31238:SF7 none none none
Phobius 11 21 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 27 27 SIGNAL_PEPTIDE none Signal peptide region none
Gene3D 28 220 193 G3DSA:2.60.120.10 none none IPR014710
Pfam 79 210 132 PF00190 none Cupin IPR006045
Phobius 22 27 6 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
SMART 70 214 145 SM00835 none Cupin IPR006045

4 Localization

Analysis Start End Length
TMHMM 7 26 19
SignalP_GRAM_NEGATIVE 1 27 26
SignalP_EUK 1 27 26
SignalP_GRAM_POSITIVE 1 28 27

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 27   Secretory pathway 1 0.982 0.013 NON-PLANT 27