Protein : Qrob_P0070250.2 Q. robur
Protein Identifier  ? Qrob_P0070250.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=82) PF00190 - Cupin Gene Prediction Quality  validated
Protein length 

Sequence

Length: 223  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0045735 nutrient reservoir activity Functions in the storage of nutritious substrates.
GO:0030145 manganese ion binding Interacting selectively and non-covalently with manganese (Mn) ions.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103338264 1 221 + 221 Gaps:5 98.67 225 65.32 3e-96 germin-like protein subfamily T member 2
blastp_kegg lcl|rcu:RCOM_1512950 4 222 + 219 Gaps:4 99.55 220 64.84 5e-96 Rhicadhesin receptor precursor putative (EC:1.15.1.1)
blastp_kegg lcl|pper:PRUPE_ppa011491mg 15 221 + 207 Gaps:4 99.52 208 66.67 4e-94 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10027191mg 27 222 + 196 Gaps:3 88.24 221 69.74 5e-94 hypothetical protein
blastp_kegg lcl|cit:102611719 27 222 + 196 Gaps:3 88.24 221 69.74 5e-94 germin-like protein subfamily T member 2-like
blastp_kegg lcl|fve:101315342 24 221 + 198 Gaps:4 88.79 223 67.17 5e-92 germin-like protein subfamily T member 2-like
blastp_kegg lcl|sly:101264308 15 222 + 208 Gaps:5 96.31 217 66.03 7e-91 germin-like protein subfamily T member 2-like
blastp_kegg lcl|tcc:TCM_045749 1 222 + 222 Gaps:8 84.41 263 63.06 9e-91 Germin-like protein subfamily T member 2
blastp_kegg lcl|pop:POPTR_0015s07940g 27 222 + 196 Gaps:4 89.09 220 66.84 5e-90 POPTRDRAFT_901916 hypothetical protein
blastp_kegg lcl|csv:101215347 1 221 + 221 Gaps:4 100.00 221 66.06 6e-90 germin-like protein subfamily T member 2-like
blastp_pdb 2ete_B 28 220 + 193 Gaps:8 98.01 201 53.81 3e-63 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2ete_A 28 220 + 193 Gaps:8 98.01 201 53.81 3e-63 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2et1_A 29 220 + 192 Gaps:8 97.51 201 54.08 4e-63 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 1fi2_A 29 220 + 192 Gaps:8 97.51 201 54.08 4e-63 mol:protein length:201 OXALATE OXIDASE
blastp_pdb 2et7_A 28 220 + 193 Gaps:8 98.01 201 53.30 2e-62 mol:protein length:201 Oxalate oxidase 1
blastp_uniprot_sprot sp|Q9LMC9|GLT2_ARATH 15 221 + 207 Gaps:4 93.18 220 61.46 2e-80 Germin-like protein subfamily T member 2 OS Arabidopsis thaliana GN At1g18980 PE 2 SV 1
blastp_uniprot_sprot sp|P92995|GLT1_ARATH 15 221 + 207 Gaps:4 93.18 220 61.46 4e-80 Germin-like protein subfamily T member 1 OS Arabidopsis thaliana GN GLP1 PE 2 SV 2
blastp_uniprot_sprot sp|P94014|GL21_ARATH 25 220 + 196 Gaps:2 89.50 219 54.59 1e-67 Germin-like protein subfamily 2 member 1 OS Arabidopsis thaliana GN GLP4 PE 2 SV 2
blastp_uniprot_sprot sp|Q75HJ4|GL38_ORYSJ 1 220 + 220 Gaps:11 100.00 225 49.33 1e-66 Germin-like protein 3-8 OS Oryza sativa subsp. japonica GN Os03g0804700 PE 2 SV 1
blastp_uniprot_sprot sp|Q851K0|GL35_ORYSJ 11 220 + 210 Gaps:6 94.27 227 51.40 1e-66 Germin-like protein 3-5 OS Oryza sativa subsp. japonica GN Os03g0693900 PE 2 SV 1
blastp_uniprot_sprot sp|Q7XZY1|GL32_ORYSJ 7 220 + 214 Gaps:11 97.75 222 47.93 4e-66 Putative germin-like protein 3-2 OS Oryza sativa subsp. japonica GN Os03g0651800 PE 3 SV 1
blastp_uniprot_sprot sp|Q851J9|GL34_ORYSJ 15 220 + 206 Gaps:6 91.70 229 51.43 6e-66 Putative germin-like protein 3-4 OS Oryza sativa subsp. japonica GN Os03g0693800 PE 3 SV 1
blastp_uniprot_sprot sp|Q851K1|GL36_ORYSJ 15 220 + 206 Gaps:6 91.70 229 51.43 7e-66 Germin-like protein 3-6 OS Oryza sativa subsp. japonica GN Os03g0694000 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FZ27|GL22_ARATH 1 222 + 222 Gaps:9 99.09 219 47.93 1e-65 Germin-like protein subfamily 2 member 2 OS Arabidopsis thaliana GN At1g02335 PE 2 SV 1
blastp_uniprot_sprot sp|P45851|OXO2_HORVU 15 222 + 208 Gaps:8 94.64 224 52.36 1e-65 Oxalate oxidase 2 OS Hordeum vulgare PE 2 SV 1
rpsblast_cdd gnl|CDD|197904 75 213 + 139 Gaps:2 95.21 146 40.29 4e-28 smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
rpsblast_cdd gnl|CDD|201069 76 214 + 139 Gaps:16 92.81 139 34.11 1e-24 pfam00190 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 8 8 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 9 220 212 PTHR31238:SF7 none none none
Phobius 29 222 194 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 79 210 132 PF00190 none Cupin IPR006045
PRINTS 144 164 21 PR00325 none Germin signature IPR001929
PRINTS 114 134 21 PR00325 none Germin signature IPR001929
PRINTS 177 192 16 PR00325 none Germin signature IPR001929
Phobius 9 20 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
SUPERFAMILY 29 219 191 SSF51182 none none IPR011051
SMART 70 214 145 SM00835 none Cupin IPR006045
Phobius 1 28 28 SIGNAL_PEPTIDE none Signal peptide region none
Gene3D 28 220 193 G3DSA:2.60.120.10 none none IPR014710
ProSitePatterns 109 122 14 PS00725 none Germin family signature. IPR019780
Phobius 21 28 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PANTHER 9 220 212 PTHR31238 none none none

3 Localization

Analysis Start End Length
SignalP_EUK 1 27 26
SignalP_GRAM_POSITIVE 1 27 26
SignalP_GRAM_NEGATIVE 1 27 26

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 27   Secretory pathway 1 0.983 0.012 NON-PLANT 27