Protein : Qrob_P0070180.2 Q. robur
Protein Identifier  ? Qrob_P0070180.2 Organism . Name  Quercus robur
Score  59.4 Score Type  egn
Protein Description  (M=9) PF04576 - Zein-binding Gene Prediction Quality  validated
Protein length 

Sequence

Length: 621  
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0 Synonyms

0 GO Terms

11 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103338270 1 618 + 618 Gaps:44 99.34 606 62.79 0.0 uncharacterized LOC103338270
blastp_kegg lcl|pper:PRUPE_ppa003082mg 1 618 + 618 Gaps:44 99.34 606 62.79 0.0 hypothetical protein
blastp_kegg lcl|mdm:103455326 1 618 + 618 Gaps:42 97.41 618 62.46 0.0 uncharacterized LOC103455326
blastp_kegg lcl|rcu:RCOM_1512920 1 620 + 620 Gaps:19 100.00 609 58.29 0.0 hypothetical protein
blastp_kegg lcl|gmx:100817859 1 612 + 612 Gaps:27 98.67 603 57.98 0.0 intracellular protein transport protein USO1-like
blastp_kegg lcl|mdm:103437776 1 618 + 618 Gaps:63 98.81 590 62.61 0.0 uncharacterized LOC103437776
blastp_kegg lcl|fve:101306928 1 614 + 614 Gaps:68 85.04 675 60.98 0.0 uncharacterized protein LOC101306928
blastp_kegg lcl|gmx:100793806 1 612 + 612 Gaps:26 98.67 602 57.07 0.0 uncharacterized LOC100793806
blastp_kegg lcl|pxb:103938448 1 618 + 618 Gaps:75 98.79 578 62.70 0.0 uncharacterized LOC103938448
blastp_kegg lcl|pxb:103958796 1 618 + 618 Gaps:75 98.79 578 62.70 0.0 uncharacterized LOC103958796
rpsblast_cdd gnl|CDD|191033 336 427 + 92 none 97.87 94 57.61 1e-30 pfam04576 Zein-binding Zein-binding. This domain binds to zein proteins pfam01559. Zein proteins are seed storage proteins.

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 2 471 470 PTHR31448 none none none
Coils 412 440 29 Coil none none none
Pfam 336 427 92 PF04576 none Zein-binding IPR007656
Phobius 20 44 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 19 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Coils 366 411 46 Coil none none none
Coils 556 577 22 Coil none none none
Phobius 45 620 576 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 2 471 470 PTHR31448:SF5 none none none

1 Localization

Analysis Start End Length
TMHMM 21 43 22

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 38   Secretory pathway 3 0.728 0.064 NON-PLANT 38