Protein : Qrob_P0070090.2 Q. robur
Protein Identifier  ? Qrob_P0070090.2 Organism . Name  Quercus robur
Score  96.5 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 120  
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0 Synonyms

0 GO Terms

11 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100251853 5 119 + 115 Gaps:1 13.12 869 65.79 3e-41 pentatricopeptide repeat-containing protein At1g74850 chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10018817mg 5 119 + 115 none 13.20 871 59.13 1e-38 hypothetical protein
blastp_kegg lcl|pmum:103338274 5 119 + 115 none 13.13 876 58.26 5e-38 pentatricopeptide repeat-containing protein At1g74850 chloroplastic
blastp_kegg lcl|cit:102619593 5 119 + 115 none 13.20 871 55.65 1e-36 pentatricopeptide repeat-containing protein At1g74850 chloroplastic-like
blastp_kegg lcl|mdm:103437768 5 119 + 115 none 13.13 876 57.39 1e-36 pentatricopeptide repeat-containing protein At1g74850 chloroplastic
blastp_kegg lcl|gmx:100797731 5 119 + 115 Gaps:1 13.27 859 57.89 9e-36 pentatricopeptide repeat-containing protein At1g74850 chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa001337mg 5 119 + 115 none 13.53 850 56.52 2e-35 hypothetical protein
blastp_kegg lcl|pxb:103958801 5 119 + 115 none 13.13 876 54.78 3e-35 pentatricopeptide repeat-containing protein At1g74850 chloroplastic
blastp_kegg lcl|tcc:TCM_011951 5 118 + 114 Gaps:1 13.15 859 61.06 7e-35 Plastid transcriptionally active 2 isoform 1
blastp_kegg lcl|mdm:103455325 5 119 + 115 none 10.83 1062 56.52 7e-35 pentatricopeptide repeat-containing protein At1g74850 chloroplastic-like
blastp_uniprot_sprot sp|Q9S7Q2|PP124_ARATH 8 118 + 111 Gaps:2 12.65 862 52.29 2e-26 Pentatricopeptide repeat-containing protein At1g74850 chloroplastic OS Arabidopsis thaliana GN PTAC2 PE 2 SV 1

0 Domain Motifs

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 53   Mitochondrion 5 0.044 0.554 NON-PLANT 53