Protein : Qrob_P0070060.2 Q. robur
Protein Identifier  ? Qrob_P0070060.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR31355:SF3 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED (PTHR31355:SF3) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 617  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.

13 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101303227 2 616 + 615 Gaps:15 99.52 623 68.39 0.0 microtubule-associated protein TORTIFOLIA1-like
blastp_kegg lcl|pmum:103338276 2 611 + 610 Gaps:14 99.19 621 68.83 0.0 microtubule-associated protein TORTIFOLIA1
blastp_kegg lcl|vvi:100263859 3 614 + 612 Gaps:15 96.71 638 65.80 0.0 microtubule-associated protein TORTIFOLIA1-like
blastp_kegg lcl|cmo:103493949 3 613 + 611 Gaps:15 98.25 629 62.94 0.0 microtubule-associated protein TORTIFOLIA1
blastp_kegg lcl|csv:101231137 3 615 + 613 Gaps:15 98.73 628 62.58 0.0 microtubule-associated protein TORTIFOLIA1-like
blastp_kegg lcl|csv:101211494 3 615 + 613 Gaps:15 98.73 628 62.58 0.0 microtubule-associated protein TORTIFOLIA1-like
blastp_kegg lcl|tcc:TCM_011955 1 616 + 616 Gaps:25 90.10 687 63.65 0.0 ARM repeat superfamily protein putative isoform 1
blastp_kegg lcl|mdm:103431173 2 616 + 615 Gaps:21 99.52 619 65.10 0.0 microtubule-associated protein TORTIFOLIA1-like
blastp_kegg lcl|mdm:103437770 2 613 + 612 Gaps:23 99.03 621 63.90 0.0 microtubule-associated protein TORTIFOLIA1
blastp_kegg lcl|gmx:100776414 3 611 + 609 Gaps:26 97.11 623 61.82 0.0 microtubule-associated protein TORTIFOLIA1-like
blastp_uniprot_sprot sp|Q9T041|MAPT_ARATH 5 521 + 517 Gaps:57 61.11 864 31.25 3e-56 Microtubule-associated protein TORTIFOLIA1 OS Arabidopsis thaliana GN TOR1 PE 1 SV 2
blastp_uniprot_sprot sp|F4I6M4|SP2L_ARATH 5 517 + 513 Gaps:45 63.58 821 29.50 6e-53 Microtubule-associated protein SPIRAL2-like OS Arabidopsis thaliana GN SP2L PE 2 SV 1
rpsblast_kog gnl|CDD|37382 20 226 + 207 Gaps:9 19.91 1075 20.09 3e-07 KOG2171 KOG2171 KOG2171 Karyopherin (importin) beta 3 [Nuclear structure Intracellular trafficking secretion and vesicular transport].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 11 291 281 G3DSA:1.25.10.10 none none IPR011989
PANTHER 2 608 607 PTHR31355:SF3 none none none
PANTHER 2 608 607 PTHR31355 none none none
Pfam 206 233 28 PF02985 none HEAT repeat IPR000357
Pfam 84 106 23 PF12765 none HEAT repeat associated with sister chromatid cohesion IPR026003
SUPERFAMILY 11 272 262 SSF48371 none none IPR016024

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting