Protein : Qrob_P0069930.2 Q. robur
Protein Identifier  ? Qrob_P0069930.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR23213//PTHR23213:SF199 - FORMIN-RELATED // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 718  
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0 Synonyms

0 GO Terms

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103338366 25 703 + 679 Gaps:36 94.41 715 65.63 0.0 formin-like protein 4
blastp_kegg lcl|pper:PRUPE_ppa025070mg 9 703 + 695 Gaps:32 96.63 713 65.60 0.0 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_009G182900g 7 704 + 698 Gaps:42 97.08 719 55.44 0.0 hypothetical protein
blastp_kegg lcl|gmx:100791689 5 717 + 713 Gaps:21 99.59 723 56.53 0.0 formin-like protein 4-like
blastp_kegg lcl|pop:POPTR_0015s08120g 21 717 + 697 Gaps:31 92.78 748 59.37 0.0 POPTRDRAFT_575096 hypothetical protein
blastp_kegg lcl|vvi:100255242 215 717 + 503 Gaps:22 70.98 734 70.44 0.0 formin-like protein 8-like
blastp_kegg lcl|sot:102580270 3 717 + 715 Gaps:73 99.34 755 53.87 0.0 formin-like protein 8-like
blastp_kegg lcl|fve:101304586 208 703 + 496 Gaps:10 64.30 762 71.43 0.0 formin-like protein 8-like
blastp_kegg lcl|sly:101249168 3 717 + 715 Gaps:69 99.33 749 54.03 0.0 formin-like protein 7-like
blastp_kegg lcl|rcu:RCOM_1512810 1 700 + 700 Gaps:30 97.15 702 58.21 0.0 actin binding protein putative
blastp_pdb 2z6e_D 241 496 + 256 Gaps:22 63.96 419 31.34 2e-22 mol:protein length:419 Disheveled-associated activator of morphogene
blastp_pdb 2z6e_C 241 496 + 256 Gaps:22 63.96 419 31.34 2e-22 mol:protein length:419 Disheveled-associated activator of morphogene
blastp_pdb 2z6e_B 241 496 + 256 Gaps:22 63.96 419 31.34 2e-22 mol:protein length:419 Disheveled-associated activator of morphogene
blastp_pdb 2z6e_A 241 496 + 256 Gaps:22 63.96 419 31.34 2e-22 mol:protein length:419 Disheveled-associated activator of morphogene
blastp_pdb 2j1d_G 255 496 + 242 Gaps:20 52.17 483 31.35 2e-22 mol:protein length:483 DISHEVELED-ASSOCIATED ACTIVATOR OF MORPHOGENE
blastp_pdb 1v9d_D 326 662 + 337 Gaps:50 86.76 340 27.46 2e-18 mol:protein length:340 Diaphanous protein homolog 1
blastp_pdb 1v9d_C 326 662 + 337 Gaps:50 86.76 340 27.46 2e-18 mol:protein length:340 Diaphanous protein homolog 1
blastp_pdb 1v9d_B 326 662 + 337 Gaps:50 86.76 340 27.46 2e-18 mol:protein length:340 Diaphanous protein homolog 1
blastp_pdb 1v9d_A 326 662 + 337 Gaps:50 86.76 340 27.46 2e-18 mol:protein length:340 Diaphanous protein homolog 1
blastp_pdb 3o4x_F 326 634 + 309 Gaps:47 57.82 467 27.78 2e-18 mol:protein length:467 Protein diaphanous homolog 1
blastp_uniprot_sprot sp|O04532|FH8_ARATH 8 716 + 709 Gaps:75 90.26 760 50.15 1e-180 Formin-like protein 8 OS Arabidopsis thaliana GN FH8 PE 1 SV 1
blastp_uniprot_sprot sp|O48682|FH4_ARATH 219 675 + 457 Gaps:23 57.40 763 57.08 7e-153 Formin-like protein 4 OS Arabidopsis thaliana GN FH4 PE 1 SV 2
blastp_uniprot_sprot sp|A3AB67|FH16_ORYSJ 247 674 + 428 Gaps:18 48.57 906 53.18 1e-145 Formin-like protein 16 OS Oryza sativa subsp. japonica GN FH16 PE 2 SV 1
blastp_uniprot_sprot sp|Q9XIE0|FH7_ARATH 252 668 + 417 Gaps:10 43.81 929 55.28 7e-138 Formin-like protein 7 OS Arabidopsis thaliana GN FH7 PE 2 SV 1
blastp_uniprot_sprot sp|Q10Q99|FH8_ORYSJ 191 676 + 486 Gaps:64 52.24 892 41.63 2e-98 Formin-like protein 8 OS Oryza sativa subsp. japonica GN FH8 PE 2 SV 1
blastp_uniprot_sprot sp|O23373|FH3_ARATH 248 675 + 428 Gaps:15 52.61 785 43.58 4e-97 Formin-like protein 3 OS Arabidopsis thaliana GN FH3 PE 2 SV 3
blastp_uniprot_sprot sp|Q9MA60|FH11_ARATH 254 667 + 414 Gaps:19 45.14 884 45.61 2e-95 Formin-like protein 11 OS Arabidopsis thaliana GN FH11 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FJX6|FH6_ARATH 225 702 + 478 Gaps:44 50.28 899 40.04 9e-91 Formin-like protein 6 OS Arabidopsis thaliana GN FH6 PE 2 SV 1
blastp_uniprot_sprot sp|Q8H8K7|FH4_ORYSJ 210 670 + 461 Gaps:41 51.59 849 40.41 6e-88 Formin-like protein 4 OS Oryza sativa subsp. japonica GN FH4 PE 3 SV 1
blastp_uniprot_sprot sp|Q94B77|FH5_ARATH 252 697 + 446 Gaps:37 49.89 900 40.98 1e-87 Formin-like protein 5 OS Arabidopsis thaliana GN FH5 PE 2 SV 2

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 149 505 357 PTHR23213:SF199 none none none
PANTHER 542 676 135 PTHR23213:SF199 none none none
Pfam 251 660 410 PF02181 none Formin Homology 2 Domain IPR015425
ProSiteProfiles 245 686 442 PS51444 none Formin homology-2 (FH2) domain profile. IPR015425
Coils 599 627 29 Coil none none none
Phobius 32 717 686 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 542 676 135 PTHR23213 none none none
SUPERFAMILY 548 673 126 SSF101447 none none none
SUPERFAMILY 258 505 248 SSF101447 none none none
SUPERFAMILY 207 212 6 SSF101447 none none none
PANTHER 149 505 357 PTHR23213 none none none
SMART 245 675 431 SM00498 none Formin Homology 2 Domain IPR015425
Phobius 1 11 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 12 31 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Coils 422 443 22 Coil none none none

1 Localization

Analysis Start End Length
TMHMM 9 31 22

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 24   Secretory pathway 1 0.906 0.044 NON-PLANT 24