Protein : Qrob_P0069270.2 Q. robur
Protein Identifier  ? Qrob_P0069270.2 Organism . Name  Quercus robur
Score  3.0 Score Type  egn
Protein Description  (M=2) PTHR12741:SF7 - gb def: ENSANGP00000009396 (Fragment) Code Enzyme  EC:2.4.1.34
Gene Prediction Quality  validated Protein length 

Sequence

Length: 1776  
Kegg Orthology  K11000
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0003843 1,3-beta-D-glucan synthase activity Catalysis of the reaction: UDP-glucose + [(1->3)-beta-D-glucosyl](n) = UDP + [(1->3)-beta-D-glucosyl](n+1).
GO:0000148 1,3-beta-D-glucan synthase complex A protein complex that catalyzes the transfer of a glucose group from UDP-glucose to a (1->3)-beta-D-glucan chain.
GO:0006075 (1->3)-beta-D-glucan biosynthetic process The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103324766 1 1775 + 1775 Gaps:22 100.00 1769 78.69 0.0 callose synthase 11
blastp_kegg lcl|mdm:103446414 1 1775 + 1775 Gaps:21 100.00 1772 77.54 0.0 callose synthase 11
blastp_kegg lcl|cit:102627313 1 1775 + 1775 Gaps:12 100.00 1771 78.71 0.0 callose synthase 11-like
blastp_kegg lcl|pop:POPTR_0011s05210g 1 1775 + 1775 Gaps:15 100.00 1778 76.27 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_029874 4 1775 + 1772 Gaps:13 99.72 1780 76.34 0.0 Glucan synthase-like 1 isoform 1
blastp_kegg lcl|fve:101295115 1 1775 + 1775 Gaps:16 100.00 1767 77.25 0.0 callose synthase 11-like
blastp_kegg lcl|pper:PRUPE_ppa000112mg 1 1775 + 1775 Gaps:65 100.00 1724 78.42 0.0 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_006G185600g 1 1774 + 1774 Gaps:19 99.94 1774 74.45 0.0 hypothetical protein
blastp_kegg lcl|gmx:100812250 1 1774 + 1774 Gaps:22 98.72 1799 74.94 0.0 callose synthase 11-like
blastp_kegg lcl|cmo:103486403 1 1774 + 1774 Gaps:20 99.94 1769 74.89 0.0 callose synthase 11
blastp_uniprot_sprot sp|Q9S9U0|CALSB_ARATH 4 1775 + 1772 Gaps:14 99.89 1768 71.86 0.0 Callose synthase 11 OS Arabidopsis thaliana GN CALS11 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZT82|CALSC_ARATH 1 1775 + 1775 Gaps:36 99.83 1780 67.47 0.0 Callose synthase 12 OS Arabidopsis thaliana GN CALS12 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LXT9|CALS3_ARATH 28 1775 + 1748 Gaps:103 89.97 1955 48.38 0.0 Callose synthase 3 OS Arabidopsis thaliana GN CALS3 PE 2 SV 3
blastp_uniprot_sprot sp|Q9AUE0|CALS1_ARATH 28 1775 + 1748 Gaps:116 90.15 1950 47.90 0.0 Callose synthase 1 OS Arabidopsis thaliana GN CALS1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SL03|CALS2_ARATH 28 1775 + 1748 Gaps:102 90.15 1950 47.78 0.0 Callose synthase 2 OS Arabidopsis thaliana GN CALS2 PE 2 SV 3
blastp_uniprot_sprot sp|Q3B724|CALS5_ARATH 28 1775 + 1748 Gaps:96 90.17 1923 48.33 0.0 Callose synthase 5 OS Arabidopsis thaliana GN CALS5 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LYS6|CALS6_ARATH 28 1775 + 1748 Gaps:129 89.90 1921 46.73 0.0 Putative callose synthase 6 OS Arabidopsis thaliana GN CALS6 PE 3 SV 2
blastp_uniprot_sprot sp|Q9SJM0|CALSA_ARATH 4 1775 + 1772 Gaps:105 90.39 1904 46.43 0.0 Callose synthase 10 OS Arabidopsis thaliana GN CALS10 PE 2 SV 5
blastp_uniprot_sprot sp|Q9SHJ3|CALS7_ARATH 13 1775 + 1763 Gaps:130 89.33 1958 45.28 0.0 Callose synthase 7 OS Arabidopsis thaliana GN CALS7 PE 3 SV 3
blastp_uniprot_sprot sp|Q9LUD7|CALS8_ARATH 28 1775 + 1748 Gaps:170 89.57 1976 45.37 0.0 Putative callose synthase 8 OS Arabidopsis thaliana GN CALS8 PE 2 SV 2
rpsblast_cdd gnl|CDD|202219 880 1653 + 774 Gaps:137 99.88 818 33.66 0.0 pfam02364 Glucan_synthase 1 3-beta-glucan synthase component. This family consists of various 1 3-beta-glucan synthase components including Gls1 Gls2 and Gls3 from yeast. 1 3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1 3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1 3)-beta-D-glucosyl}(N) < > UDP + {(1 3)-beta-D-glucosyl}(N+1).
rpsblast_cdd gnl|CDD|206456 165 281 + 117 Gaps:4 100.00 113 46.90 4e-48 pfam14288 FKS1_dom1 1 3-beta-glucan synthase subunit FKS1 domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1 3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase pfam02364.
rpsblast_kog gnl|CDD|36134 26 1775 + 1750 Gaps:264 89.82 1679 50.93 0.0 KOG0916 KOG0916 KOG0916 1 3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis].

42 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1394 1414 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 462 478 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 43 1022 980 PTHR12741 none none none
PANTHER 1055 1775 721 PTHR12741:SF7 none none none
Phobius 1513 1536 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 557 562 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 582 1351 770 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1374 1393 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 43 1022 980 PTHR12741:SF7 none none none
Phobius 451 461 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1426 1446 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1744 1775 32 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 427 450 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1587 1608 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 336 346 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1415 1425 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 880 1653 774 PF02364 "KEGG:00500+2.4.1.34","MetaCyc:PWY-6773" 1,3-beta-glucan synthase component IPR003440
Phobius 1609 1619 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1681 1704 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1705 1723 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 490 510 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1447 1512 66 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 539 556 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 369 387 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Coils 792 813 22 Coil none none none
Pfam 166 279 114 PF14288 "KEGG:00500+2.4.1.34","MetaCyc:PWY-6773" 1,3-beta-glucan synthase subunit FKS1, domain-1 IPR026899
Phobius 1 316 316 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 388 406 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1055 1775 721 PTHR12741 none none none
Phobius 407 426 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

16 Localization

Analysis Start End Length
TMHMM 317 334 17
TMHMM 384 406 22
TMHMM 1514 1536 22
TMHMM 1687 1709 22
TMHMM 1652 1674 22
TMHMM 561 583 22
TMHMM 1429 1446 17
TMHMM 1724 1746 22
TMHMM 1620 1642 22
TMHMM 539 556 17
TMHMM 1392 1414 22
TMHMM 1345 1367 22
TMHMM 492 512 20
TMHMM 427 449 22
TMHMM 1487 1504 17
TMHMM 462 479 17

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 50   Mitochondrion 5 0.039 0.601 NON-PLANT 50