Protein : Qrob_P0068270.2 Q. robur
Protein Identifier  ? Qrob_P0068270.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=2) K12852 - 116 kDa U5 small nuclear ribonucleoprotein component Code Enzyme  EC:3.6.5.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 999  
Kegg Orthology  K12852
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0003924 GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.

48 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100253367 1 998 + 998 Gaps:12 100.00 988 91.09 0.0 116 kDa U5 small nuclear ribonucleoprotein component-like
blastp_kegg lcl|csv:101228556 1 998 + 998 Gaps:12 100.00 988 90.49 0.0 116 kDa U5 small nuclear ribonucleoprotein component-like
blastp_kegg lcl|csv:101210594 1 998 + 998 Gaps:12 100.00 988 90.49 0.0 116 kDa U5 small nuclear ribonucleoprotein component-like
blastp_kegg lcl|pper:PRUPE_ppa000830mg 1 998 + 998 Gaps:12 100.00 988 90.38 0.0 hypothetical protein
blastp_kegg lcl|pmum:103327591 1 998 + 998 Gaps:12 100.00 988 90.28 0.0 116 kDa U5 small nuclear ribonucleoprotein component-like
blastp_kegg lcl|cit:102615488 1 998 + 998 Gaps:13 100.00 989 90.09 0.0 116 kDa U5 small nuclear ribonucleoprotein component-like
blastp_kegg lcl|cmo:103496558 1 998 + 998 Gaps:12 100.00 988 90.59 0.0 116 kDa U5 small nuclear ribonucleoprotein component-like
blastp_kegg lcl|cic:CICLE_v10007342mg 1 998 + 998 Gaps:13 100.00 989 89.99 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_041395 1 998 + 998 Gaps:14 100.00 990 90.00 0.0 Ribosomal protein S5/Elongation factor G/III/V family protein
blastp_kegg lcl|mdm:103431389 1 998 + 998 Gaps:12 100.00 988 89.98 0.0 116 kDa U5 small nuclear ribonucleoprotein component-like
blastp_pdb 3dny_T 131 972 + 842 Gaps:51 97.51 842 40.19 0.0 mol:protein length:842 Elongation factor 2
blastp_pdb 3b8h_E 131 972 + 842 Gaps:51 97.51 842 40.19 0.0 mol:protein length:842 Elongation factor 2
blastp_pdb 3b8h_C 131 972 + 842 Gaps:51 97.51 842 40.19 0.0 mol:protein length:842 Elongation factor 2
blastp_pdb 3b8h_A 131 972 + 842 Gaps:51 97.51 842 40.19 0.0 mol:protein length:842 Elongation factor 2
blastp_pdb 3b82_E 131 972 + 842 Gaps:51 97.51 842 40.19 0.0 mol:protein length:842 Elongation factor 2
blastp_pdb 3b82_C 131 972 + 842 Gaps:51 97.51 842 40.19 0.0 mol:protein length:842 Elongation factor 2
blastp_pdb 3b82_A 131 972 + 842 Gaps:51 97.51 842 40.19 0.0 mol:protein length:842 Elongation factor 2
blastp_pdb 3b78_E 131 972 + 842 Gaps:51 97.51 842 40.19 0.0 mol:protein length:842 Elongation factor 2
blastp_pdb 3b78_C 131 972 + 842 Gaps:51 97.51 842 40.19 0.0 mol:protein length:842 Elongation factor 2
blastp_pdb 3b78_A 131 972 + 842 Gaps:51 97.51 842 40.19 0.0 mol:protein length:842 Elongation factor 2
blastp_uniprot_sprot sp|O08810|U5S1_MOUSE 1 997 + 997 Gaps:28 100.00 971 61.89 0.0 116 kDa U5 small nuclear ribonucleoprotein component OS Mus musculus GN Eftud2 PE 2 SV 1
blastp_uniprot_sprot sp|Q15029|U5S1_HUMAN 1 997 + 997 Gaps:27 100.00 972 61.63 0.0 116 kDa U5 small nuclear ribonucleoprotein component OS Homo sapiens GN EFTUD2 PE 1 SV 1
blastp_uniprot_sprot sp|Q5F3X4|U5S1_CHICK 1 997 + 997 Gaps:27 100.00 972 61.63 0.0 116 kDa U5 small nuclear ribonucleoprotein component OS Gallus gallus GN EFTUD2 PE 2 SV 1
blastp_uniprot_sprot sp|A4FUD3|U5S1_BOVIN 1 997 + 997 Gaps:27 100.00 972 61.52 0.0 116 kDa U5 small nuclear ribonucleoprotein component OS Bos taurus GN EFTUD2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5R6E0|U5S1_PONAB 1 997 + 997 Gaps:27 100.00 972 61.52 0.0 116 kDa U5 small nuclear ribonucleoprotein component OS Pongo abelii GN EFTUD2 PE 2 SV 1
blastp_uniprot_sprot sp|O94316|SN114_SCHPO 1 993 + 993 Gaps:22 99.70 984 52.29 0.0 Pre-mRNA-splicing factor cwf10 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN cwf10 PE 1 SV 2
blastp_uniprot_sprot sp|Q96X45|EF2_NEUCR 131 972 + 842 Gaps:53 97.51 844 42.16 0.0 Elongation factor 2 OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN cot-3 PE 3 SV 3
blastp_uniprot_sprot sp|Q90705|EF2_CHICK 131 980 + 850 Gaps:64 98.60 858 40.66 0.0 Elongation factor 2 OS Gallus gallus GN EEF2 PE 1 SV 3
blastp_uniprot_sprot sp|Q23716|EF2_CRYPV 131 980 + 850 Gaps:44 98.56 832 40.61 0.0 Elongation factor 2 OS Cryptosporidium parvum PE 3 SV 1
blastp_uniprot_sprot sp|P13060|EF2_DROME 130 980 + 851 Gaps:54 98.70 844 40.34 0.0 Elongation factor 2 OS Drosophila melanogaster GN EF2 PE 1 SV 4

35 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 333 437 105 G3DSA:3.90.1430.10 none none none
Pfam 732 848 117 PF03764 none Elongation factor G, domain IV IPR005517
Pfam 851 939 89 PF00679 none Elongation factor G C-terminus IPR000640
PRINTS 140 153 14 PR00315 none GTP-binding elongation factor signature IPR000795
PRINTS 212 222 11 PR00315 none GTP-binding elongation factor signature IPR000795
PRINTS 228 239 12 PR00315 none GTP-binding elongation factor signature IPR000795
PRINTS 264 273 10 PR00315 none GTP-binding elongation factor signature IPR000795
Gene3D 602 675 74 G3DSA:3.30.70.870 none none none
SUPERFAMILY 854 941 88 SSF54980 none none IPR009022
Gene3D 854 967 114 G3DSA:3.30.70.240 none none IPR000640
PANTHER 3 24 22 PTHR23115 none none none
PANTHER 422 709 288 PTHR23115 none none none
PANTHER 313 393 81 PTHR23115 none none none
PANTHER 789 966 178 PTHR23115:SF5 none none none
PANTHER 313 393 81 PTHR23115:SF5 none none none
PANTHER 128 297 170 PTHR23115 none none none
SUPERFAMILY 457 584 128 SSF50447 none none IPR009000
Gene3D 449 599 151 G3DSA:2.40.30.10 none none none
SUPERFAMILY 126 453 328 SSF52540 none none IPR027417
SUPERFAMILY 676 853 178 SSF54211 none none IPR020568
SMART 729 849 121 SM00889 none Elongation factor G, domain IV IPR005517
Pfam 506 580 75 PF03144 none Elongation factor Tu domain 2 IPR004161
Pfam 138 332 195 PF00009 none Elongation factor Tu GTP binding domain none
PANTHER 67 111 45 PTHR23115:SF5 none none none
SMART 851 940 90 SM00838 none Elongation factor G C-terminus IPR000640
Gene3D 131 331 201 G3DSA:3.40.50.300 none none IPR027417
SUPERFAMILY 601 674 74 SSF54980 none none IPR009022
PANTHER 789 966 178 PTHR23115 none none none
PANTHER 67 111 45 PTHR23115 none none none
ProSiteProfiles 136 344 209 PS51722 none Translational (tr)-type guanine nucleotide-binding (G) domain profile. IPR000795

0 Localization

0 Qtllist

0 Targeting