Protein : Qrob_P0067620.2 Q. robur
Protein Identifier  ? Qrob_P0067620.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) PTHR11566//PTHR11566:SF41 - DYNAMIN // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 611  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0003924 GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103504460 1 610 + 610 Gaps:2 100.00 612 92.97 0.0 dynamin-related protein 1C
blastp_kegg lcl|pop:POPTR_0010s11630g 1 610 + 610 Gaps:3 100.00 613 92.33 0.0 POPTRDRAFT_822051 DYNAMIN-LIKE protein 5
blastp_kegg lcl|rcu:RCOM_0053600 1 610 + 610 Gaps:12 100.00 622 89.39 0.0 dynamin putative
blastp_kegg lcl|aly:ARALYDRAFT_888870 1 610 + 610 Gaps:6 100.00 614 89.41 0.0 hypothetical protein
blastp_kegg lcl|eus:EUTSA_v10007102mg 1 610 + 610 Gaps:6 100.00 614 89.41 0.0 hypothetical protein
blastp_kegg lcl|ath:AT1G14830 1 610 + 610 Gaps:6 100.00 614 89.25 0.0 DL1C dynamin-related protein 1C
blastp_kegg lcl|crb:CARUB_v10008553mg 1 610 + 610 Gaps:6 100.00 614 89.25 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10014606mg 1 610 + 610 Gaps:15 100.00 625 88.16 0.0 hypothetical protein
blastp_kegg lcl|cit:102630404 1 610 + 610 Gaps:15 100.00 625 88.16 0.0 dynamin-related protein 1C-like
blastp_kegg lcl|cam:101491582 1 610 + 610 Gaps:6 100.00 616 87.50 0.0 dynamin-related protein 1C-like
blastp_pdb 3zvr_A 4 489 + 486 Gaps:19 62.56 772 42.03 1e-117 mol:protein length:772 DYNAMIN-1
blastp_pdb 3snh_A 4 489 + 486 Gaps:19 65.01 743 41.61 8e-117 mol:protein length:743 Dynamin-1
blastp_pdb 2aka_B 4 302 + 299 Gaps:8 97.32 299 56.70 4e-106 mol:protein length:299 Dynamin-1
blastp_pdb 3zys_D 3 337 + 335 Gaps:16 94.90 353 52.24 9e-106 mol:protein length:353 DYNAMIN-1
blastp_pdb 3zys_A 3 337 + 335 Gaps:16 94.90 353 52.24 9e-106 mol:protein length:353 DYNAMIN-1
blastp_pdb 3zyc_D 3 337 + 335 Gaps:16 94.90 353 52.24 9e-106 mol:protein length:353 DYNAMIN-1
blastp_pdb 3zyc_A 3 337 + 335 Gaps:16 94.90 353 52.24 9e-106 mol:protein length:353 DYNAMIN-1
blastp_pdb 2x2f_D 3 337 + 335 Gaps:16 94.90 353 52.24 9e-106 mol:protein length:353 DYNAMIN-1
blastp_pdb 2x2f_A 3 337 + 335 Gaps:16 94.90 353 52.24 9e-106 mol:protein length:353 DYNAMIN-1
blastp_pdb 2x2e_D 3 337 + 335 Gaps:16 94.90 353 52.24 9e-106 mol:protein length:353 DYNAMIN-1
blastp_uniprot_sprot sp|Q8LF21|DRP1C_ARATH 1 610 + 610 Gaps:6 100.00 614 89.25 0.0 Dynamin-related protein 1C OS Arabidopsis thaliana GN DRP1C PE 1 SV 2
blastp_uniprot_sprot sp|Q9FNX5|DRP1E_ARATH 1 609 + 609 Gaps:13 99.68 624 79.26 0.0 Dynamin-related protein 1E OS Arabidopsis thaliana GN DRP1E PE 1 SV 1
blastp_uniprot_sprot sp|Q8S3C9|DRP1D_ARATH 4 609 + 606 Gaps:4 99.67 612 75.57 0.0 Dynamin-related protein 1D OS Arabidopsis thaliana GN DRP1D PE 2 SV 2
blastp_uniprot_sprot sp|Q39828|SDL5A_SOYBN 4 609 + 606 Gaps:4 99.67 610 69.08 0.0 Dynamin-related protein 5A OS Glycine max PE 2 SV 1
blastp_uniprot_sprot sp|Q39821|SDLCA_SOYBN 4 609 + 606 Gaps:4 99.67 610 68.59 0.0 Dynamin-related protein 12A OS Glycine max PE 1 SV 1
blastp_uniprot_sprot sp|Q84XF3|DRP1B_ARATH 4 609 + 606 Gaps:6 99.67 610 69.08 0.0 Dynamin-related protein 1B OS Arabidopsis thaliana GN DRP1B PE 2 SV 1
blastp_uniprot_sprot sp|P42697|DRP1A_ARATH 4 609 + 606 Gaps:4 99.67 610 69.08 0.0 Dynamin-related protein 1A OS Arabidopsis thaliana GN DRP1A PE 1 SV 3
blastp_uniprot_sprot sp|P21575|DYN1_RAT 4 489 + 486 Gaps:19 55.90 864 42.24 9e-117 Dynamin-1 OS Rattus norvegicus GN Dnm1 PE 1 SV 2
blastp_uniprot_sprot sp|P39053|DYN1_MOUSE 4 489 + 486 Gaps:19 55.71 867 41.82 3e-116 Dynamin-1 OS Mus musculus GN Dnm1 PE 1 SV 2
blastp_uniprot_sprot sp|Q08DF4|DYN1_BOVIN 4 489 + 486 Gaps:19 56.43 856 42.03 6e-116 Dynamin-1 OS Bos taurus GN DNM1 PE 2 SV 1

18 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 61 70 10 PS00410 none Dynamin-type guanine nucleotide-binding (G) domain signature. IPR019762
SUPERFAMILY 4 308 305 SSF52540 none none IPR027417
Gene3D 2 309 308 G3DSA:3.40.50.300 none none IPR027417
PANTHER 1 610 610 PTHR11566:SF41 none none none
PRINTS 132 149 18 PR00195 none Dynamin signature IPR022812
PRINTS 201 217 17 PR00195 none Dynamin signature IPR022812
PRINTS 35 53 19 PR00195 none Dynamin signature IPR022812
PRINTS 224 243 20 PR00195 none Dynamin signature IPR022812
PRINTS 60 77 18 PR00195 none Dynamin signature IPR022812
PRINTS 182 200 19 PR00195 none Dynamin signature IPR022812
Pfam 222 490 269 PF01031 none Dynamin central region IPR000375
ProSiteProfiles 32 300 269 PS51718 none Dynamin-type guanine nucleotide-binding (G) domain profile. IPR030381
SMART 4 251 248 SM00053 none Dynamin, GTPase IPR001401
SMART 514 607 94 SM00302 none Dynamin GTPase effector domain IPR003130
PANTHER 1 610 610 PTHR11566 none none IPR022812
ProSiteProfiles 519 610 92 PS51388 none GED domain profile. IPR020850
Pfam 38 213 176 PF00350 none Dynamin family none
Pfam 516 607 92 PF02212 none Dynamin GTPase effector domain IPR003130

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting