Protein : Qrob_P0067530.2 Q. robur
Protein Identifier  ? Qrob_P0067530.2 Organism . Name  Quercus robur
Score  64.0 Score Type  egn
Protein Description  (M=3) PTHR10381:SF11 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT, MITOCHONDRIAL-RELATED (PTHR10381:SF11) Code Enzyme  EC:3.4.21.92
Gene Prediction Quality  validated Protein length 

Sequence

Length: 240  
Kegg Orthology  K01358
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO:0004252 serine-type endopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103321077 1 238 + 238 Gaps:2 97.52 242 84.75 9e-145 ATP-dependent Clp protease proteolytic subunit 2 mitochondrial
blastp_kegg lcl|pper:PRUPE_ppa010637mg 1 238 + 238 Gaps:2 97.52 242 84.75 2e-144 hypothetical protein
blastp_kegg lcl|vvi:100266180 27 239 + 213 Gaps:1 87.97 241 91.98 3e-144 ATP-dependent Clp protease proteolytic subunit 2 mitochondrial-like
blastp_kegg lcl|rcu:RCOM_1375740 1 239 + 239 Gaps:4 81.42 296 82.99 8e-144 ATP-dependent Clp protease proteolytic subunit putative (EC:3.4.21.92)
blastp_kegg lcl|gmx:100782585 10 239 + 230 Gaps:6 94.12 238 87.95 4e-142 ATP-dependent Clp protease proteolytic subunit 2 mitochondrial-like
blastp_kegg lcl|fve:101291620 1 237 + 237 Gaps:7 95.87 242 85.78 4e-142 ATP-dependent Clp protease proteolytic subunit 2 mitochondrial-like
blastp_kegg lcl|pxb:103943214 1 238 + 238 Gaps:6 97.89 237 84.48 5e-142 ATP-dependent Clp protease proteolytic subunit 2 mitochondrial
blastp_kegg lcl|tcc:TCM_007735 1 237 + 237 Gaps:3 94.74 247 83.76 2e-141 Nuclear-encoded CLP protease P7
blastp_kegg lcl|mdm:103425601 1 238 + 238 Gaps:6 97.89 237 84.05 5e-141 ATP-dependent Clp protease proteolytic subunit 2 mitochondrial-like
blastp_kegg lcl|gmx:100791303 10 239 + 230 Gaps:8 94.07 236 86.94 2e-140 ATP-dependent Clp protease proteolytic subunit 2 mitochondrial-like
blastp_pdb 1tg6_G 27 222 + 196 none 70.76 277 61.22 1e-84 mol:protein length:277 Putative ATP-dependent Clp protease proteolyt
blastp_pdb 1tg6_F 27 222 + 196 none 70.76 277 61.22 1e-84 mol:protein length:277 Putative ATP-dependent Clp protease proteolyt
blastp_pdb 1tg6_E 27 222 + 196 none 70.76 277 61.22 1e-84 mol:protein length:277 Putative ATP-dependent Clp protease proteolyt
blastp_pdb 1tg6_D 27 222 + 196 none 70.76 277 61.22 1e-84 mol:protein length:277 Putative ATP-dependent Clp protease proteolyt
blastp_pdb 1tg6_C 27 222 + 196 none 70.76 277 61.22 1e-84 mol:protein length:277 Putative ATP-dependent Clp protease proteolyt
blastp_pdb 1tg6_B 27 222 + 196 none 70.76 277 61.22 1e-84 mol:protein length:277 Putative ATP-dependent Clp protease proteolyt
blastp_pdb 1tg6_A 27 222 + 196 none 70.76 277 61.22 1e-84 mol:protein length:277 Putative ATP-dependent Clp protease proteolyt
blastp_pdb 3p2l_G 30 221 + 192 none 95.52 201 56.77 7e-80 mol:protein length:201 ATP-dependent Clp protease proteolytic subuni
blastp_pdb 3p2l_F 30 221 + 192 none 95.52 201 56.77 7e-80 mol:protein length:201 ATP-dependent Clp protease proteolytic subuni
blastp_pdb 3p2l_E 30 221 + 192 none 95.52 201 56.77 7e-80 mol:protein length:201 ATP-dependent Clp protease proteolytic subuni
blastp_uniprot_sprot sp|Q9FN42|CLPP2_ARATH 1 238 + 238 Gaps:1 98.34 241 80.59 2e-138 ATP-dependent Clp protease proteolytic subunit 2 mitochondrial OS Arabidopsis thaliana GN CLPP2 PE 1 SV 1
blastp_uniprot_sprot sp|Q6G178|CLPP_BARQU 21 221 + 201 none 95.71 210 60.20 7e-91 ATP-dependent Clp protease proteolytic subunit OS Bartonella quintana (strain Toulouse) GN clpP PE 3 SV 1
blastp_uniprot_sprot sp|A9ISA4|CLPP_BART1 21 221 + 201 none 95.71 210 60.70 1e-90 ATP-dependent Clp protease proteolytic subunit OS Bartonella tribocorum (strain CIP 105476 / IBS 506) GN clpP PE 3 SV 1
blastp_uniprot_sprot sp|Q6G3Z3|CLPP_BARHE 21 221 + 201 none 95.71 210 59.20 1e-89 ATP-dependent Clp protease proteolytic subunit OS Bartonella henselae (strain ATCC 49882 / Houston 1) GN clpP PE 3 SV 1
blastp_uniprot_sprot sp|A1USA7|CLPP_BARBK 28 221 + 194 none 92.38 210 61.34 7e-89 ATP-dependent Clp protease proteolytic subunit OS Bartonella bacilliformis (strain ATCC 35685 / KC583) GN clpP PE 3 SV 1
blastp_uniprot_sprot sp|B0CGR1|CLPP_BRUSI 21 221 + 201 none 96.17 209 58.21 3e-88 ATP-dependent Clp protease proteolytic subunit OS Brucella suis (strain ATCC 23445 / NCTC 10510) GN clpP PE 3 SV 1
blastp_uniprot_sprot sp|A9M5C2|CLPP_BRUC2 21 221 + 201 none 96.17 209 58.21 3e-88 ATP-dependent Clp protease proteolytic subunit OS Brucella canis (strain ATCC 23365 / NCTC 10854) GN clpP PE 3 SV 1
blastp_uniprot_sprot sp|Q9L7X6|CLPP_BRUAB 21 221 + 201 none 96.17 209 58.21 3e-88 ATP-dependent Clp protease proteolytic subunit OS Brucella abortus biovar 1 (strain 9-941) GN clpP PE 3 SV 1
blastp_uniprot_sprot sp|Q2YPX1|CLPP_BRUA2 21 221 + 201 none 96.17 209 58.21 3e-88 ATP-dependent Clp protease proteolytic subunit OS Brucella abortus (strain 2308) GN clpP PE 3 SV 1
blastp_uniprot_sprot sp|B2S5W1|CLPP_BRUA1 21 221 + 201 none 96.17 209 58.21 3e-88 ATP-dependent Clp protease proteolytic subunit OS Brucella abortus (strain S19) GN clpP PE 3 SV 1

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 140 153 14 PS00382 none Endopeptidase Clp histidine active site. IPR018215
PANTHER 1 222 222 PTHR10381:SF11 none none none
Phobius 3 13 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PRINTS 47 62 16 PR00127 none Clp protease catalytic subunit P signature IPR001907
PRINTS 196 215 20 PR00127 none Clp protease catalytic subunit P signature IPR001907
PRINTS 139 158 20 PR00127 none Clp protease catalytic subunit P signature IPR001907
PRINTS 118 135 18 PR00127 none Clp protease catalytic subunit P signature IPR001907
PRINTS 87 107 21 PR00127 none Clp protease catalytic subunit P signature IPR001907
ProSitePatterns 118 129 12 PS00381 none Endopeptidase Clp serine active site. IPR018215
Phobius 14 18 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Gene3D 31 220 190 G3DSA:3.90.226.10 none none IPR029045
PANTHER 1 222 222 PTHR10381 none none IPR023562
Phobius 1 2 2 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 1 18 18 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 19 239 221 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 39 222 184 SSF52096 none none IPR029045
Pfam 40 220 181 PF00574 none Clp protease IPR023562

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 11   Mitochondrion 1 0.050 0.918 NON-PLANT 11