Protein : Qrob_P0065040.2 Q. robur
Protein Identifier  ? Qrob_P0065040.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=40) 2.4.1.12 - Cellulose synthase (UDP-forming). Code Enzyme  EC:2.4.1.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 530  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0030244 cellulose biosynthetic process The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.
GO:0016760 cellulose synthase (UDP-forming) activity Catalysis of the reaction: UDP-glucose + ((1,4)-beta-D-glucosyl)(n) = UDP + ((1,4)-beta-D-glucosyl)(n+1).

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100256938 1 529 + 529 none 71.97 735 69.38 0.0 cellulose synthase-like protein E6-like
blastp_kegg lcl|pop:POPTR_0006s00620g 1 529 + 529 none 72.27 732 68.81 0.0 POPTRDRAFT_560094 hypothetical protein
blastp_kegg lcl|vvi:100852513 1 529 + 529 none 71.97 735 68.43 0.0 cellulose synthase-like protein E6-like
blastp_kegg lcl|vvi:100855281 1 529 + 529 Gaps:1 72.21 734 68.11 0.0 cellulose synthase-like protein E6-like
blastp_kegg lcl|vvi:100855180 1 517 + 517 none 70.34 735 69.05 0.0 cellulose synthase-like protein E6-like
blastp_kegg lcl|tcc:TCM_025918 1 529 + 529 Gaps:1 72.70 729 67.36 0.0 Cellulose synthase like E1
blastp_kegg lcl|tcc:TCM_046806 1 529 + 529 Gaps:2 72.24 735 66.67 0.0 Cellulose synthase like E1 putative
blastp_kegg lcl|vvi:100855110 1 516 + 516 none 70.20 735 67.83 0.0 cellulose synthase-like protein E6-like
blastp_kegg lcl|vvi:100250126 1 516 + 516 none 70.20 735 67.44 0.0 cellulose synthase-like protein E6-like
blastp_kegg lcl|pop:POPTR_0006s00610g 1 529 + 529 Gaps:13 71.87 718 66.09 0.0 hypothetical protein
blastp_uniprot_sprot sp|Q651X6|CSLE6_ORYSJ 1 523 + 523 Gaps:4 71.29 728 54.91 0.0 Cellulose synthase-like protein E6 OS Oryza sativa subsp. japonica GN CSLE6 PE 2 SV 1
blastp_uniprot_sprot sp|Q651X7|CSLE1_ORYSJ 1 528 + 528 none 71.64 737 51.89 0.0 Cellulose synthase-like protein E1 OS Oryza sativa subsp. japonica GN CSLE1 PE 2 SV 2
blastp_uniprot_sprot sp|Q8VZK9|CSLE1_ARATH 1 524 + 524 Gaps:21 70.37 729 54.58 0.0 Cellulose synthase-like protein E1 OS Arabidopsis thaliana GN CSLE1 PE 1 SV 1
blastp_uniprot_sprot sp|Q0DXZ1|CSLE2_ORYSJ 1 528 + 528 Gaps:2 70.60 745 51.52 0.0 Cellulose synthase-like protein E2 OS Oryza sativa subsp. japonica GN CSLE2 PE 2 SV 1
blastp_uniprot_sprot sp|Q0WVN5|CSLG3_ARATH 1 522 + 522 Gaps:14 69.51 751 38.12 4e-117 Cellulose synthase-like protein G3 OS Arabidopsis thaliana GN CSLG3 PE 2 SV 2
blastp_uniprot_sprot sp|Q8VYR4|CSLG2_ARATH 1 522 + 522 Gaps:21 71.33 722 35.92 7e-114 Cellulose synthase-like protein G2 OS Arabidopsis thaliana GN CSLG2 PE 2 SV 1
blastp_uniprot_sprot sp|Q570S7|CSLG1_ARATH 1 508 + 508 Gaps:12 66.84 760 37.40 2e-112 Cellulose synthase-like protein G1 OS Arabidopsis thaliana GN CSLG1 PE 2 SV 1
blastp_uniprot_sprot sp|Q69P51|CESA9_ORYSJ 35 520 + 486 Gaps:70 51.18 1055 33.15 2e-85 Cellulose synthase A catalytic subunit 9 [UDP-forming] OS Oryza sativa subsp. japonica GN CESA9 PE 2 SV 1
blastp_uniprot_sprot sp|A2Z1C8|CESA9_ORYSI 35 520 + 486 Gaps:70 51.18 1055 33.15 2e-85 Cellulose synthase A catalytic subunit 9 [UDP-forming] OS Oryza sativa subsp. indica GN CESA9 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SWW6|CESA7_ARATH 13 520 + 508 Gaps:82 55.56 1026 31.58 1e-82 Cellulose synthase A catalytic subunit 7 [UDP-forming] OS Arabidopsis thaliana GN CESA7 PE 1 SV 1
rpsblast_cdd gnl|CDD|178481 1 520 + 520 Gaps:14 70.84 734 40.00 1e-131 PLN02893 PLN02893 Cellulose synthase-like protein.
rpsblast_cdd gnl|CDD|177841 35 520 + 486 Gaps:84 51.73 1040 34.39 4e-83 PLN02189 PLN02189 cellulose synthase.
rpsblast_cdd gnl|CDD|146277 33 467 + 435 Gaps:87 70.11 716 32.27 9e-78 pfam03552 Cellulose_synt Cellulose synthase. Cellulose an aggregate of unbranched polymers of beta-1 4-linked glucose residues is the major component of wood and thus paper and is synthesised by plants most algae some bacteria and fungi and even some animals. The genes that synthesise cellulose in higher plants differ greatly from the well-characterized genes found in Acetobacter and Agrobacterium sp. More correctly designated as 'cellulose synthase catalytic subunits' plant cellulose synthase (CesA) proteins are integral membrane proteins approximately 1 000 amino acids in length. There are a number of highly conserved residues including several motifs shown to be necessary for processive glycosyltransferase activity.
rpsblast_cdd gnl|CDD|178244 35 426 + 392 Gaps:84 43.74 1079 32.63 1e-74 PLN02638 PLN02638 cellulose synthase A (UDP-forming) catalytic subunit.
rpsblast_cdd gnl|CDD|177842 36 528 + 493 Gaps:88 69.71 756 32.45 2e-67 PLN02190 PLN02190 cellulose synthase-like protein.
rpsblast_cdd gnl|CDD|178055 35 520 + 486 Gaps:26 43.42 1094 38.53 6e-45 PLN02436 PLN02436 cellulose synthase A.
rpsblast_cdd gnl|CDD|177846 35 425 + 391 Gaps:11 37.87 977 41.89 8e-45 PLN02195 PLN02195 cellulose synthase A.
rpsblast_cdd gnl|CDD|178503 35 467 + 433 Gaps:19 41.00 1044 39.02 1e-44 PLN02915 PLN02915 cellulose synthase A [UDP-forming] catalytic subunit.
rpsblast_cdd gnl|CDD|177890 33 467 + 435 Gaps:28 35.77 1135 35.96 2e-41 PLN02248 PLN02248 cellulose synthase-like protein.
rpsblast_cdd gnl|CDD|178022 35 426 + 392 Gaps:4 33.92 1085 39.67 2e-39 PLN02400 PLN02400 cellulose synthase.

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 473 496 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 33 521 489 PTHR13301 none none none
Phobius 397 418 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 32 191 160 PF03552 none Cellulose synthase IPR005150
Pfam 207 522 316 PF03552 none Cellulose synthase IPR005150
Phobius 462 472 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 419 437 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 313 333 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 438 461 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 312 312 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 529 529 1 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 33 521 489 PTHR13301:SF27 none none none
Phobius 377 396 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 497 507 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 353 376 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 334 352 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 508 528 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

6 Localization

Analysis Start End Length
TMHMM 473 495 22
TMHMM 505 527 22
TMHMM 438 460 22
TMHMM 353 375 22
TMHMM 311 333 22
TMHMM 396 418 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5

0 Targeting