Protein : Qrob_P0064920.2 Q. robur
Protein Identifier  ? Qrob_P0064920.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=215) PF00954 - S-locus glycoprotein family Code Enzyme  EC:2.7.11.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 168  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0048544 recognition of pollen The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103448572 1 163 + 163 Gaps:11 20.66 823 50.00 2e-51 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290
blastp_kegg lcl|pxb:103946653 1 163 + 163 Gaps:24 19.80 1692 45.07 4e-51 uncharacterized LOC103946653
blastp_kegg lcl|pxb:103941313 1 163 + 163 Gaps:24 20.34 1647 45.07 4e-51 uncharacterized LOC103941313
blastp_kegg lcl|pxb:103946546 3 163 + 161 Gaps:11 20.36 825 49.40 3e-50 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290
blastp_kegg lcl|pper:PRUPE_ppa018069mg 2 163 + 162 Gaps:11 23.12 731 49.11 2e-49 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa001795mg 2 163 + 162 Gaps:11 22.15 763 49.70 1e-48 hypothetical protein
blastp_kegg lcl|pmum:103326307 2 163 + 162 Gaps:11 20.74 815 49.70 1e-48 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290
blastp_kegg lcl|mdm:103423008 3 163 + 161 Gaps:11 20.77 809 48.21 2e-48 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290
blastp_kegg lcl|pper:PRUPE_ppa016527mg 2 163 + 162 Gaps:11 19.67 859 49.70 3e-48 hypothetical protein
blastp_kegg lcl|mdm:103430131 3 163 + 161 Gaps:23 20.37 1640 46.11 1e-47 receptor-like serine/threonine-protein kinase SD1-6
blastp_uniprot_sprot sp|O81832|Y4729_ARATH 2 162 + 161 Gaps:11 21.20 783 39.76 8e-35 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS Arabidopsis thaliana GN At4g27290 PE 3 SV 4
blastp_uniprot_sprot sp|P0DH87|PSRK_ARATH 6 163 + 158 Gaps:13 29.49 546 35.40 2e-27 Putative inactive G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS Arabidopsis thaliana GN PSEUDOSRKA PE 5 SV 1
blastp_uniprot_sprot sp|P0DH86|SRK_ARATH 6 163 + 158 Gaps:13 18.87 853 35.40 4e-27 G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS Arabidopsis thaliana GN SRK PE 2 SV 1
blastp_uniprot_sprot sp|P07761|SLSG6_BRAOL 9 163 + 155 Gaps:14 36.47 436 35.22 2e-26 S-locus-specific glycoprotein S6 OS Brassica oleracea GN SLSG PE 2 SV 2
blastp_uniprot_sprot sp|P17840|SLSG3_BRAOL 2 163 + 162 Gaps:13 37.93 435 33.33 4e-26 S-locus-specific glycoprotein S13 OS Brassica oleracea GN SLSG PE 2 SV 2
blastp_uniprot_sprot sp|Q09092|SRK6_BRAOE 9 163 + 155 Gaps:14 18.55 857 35.85 7e-26 Putative serine/threonine-protein kinase receptor OS Brassica oleracea var. acephala GN SRK6 PE 2 SV 2
blastp_uniprot_sprot sp|O81905|SD18_ARATH 5 163 + 159 Gaps:12 19.18 850 34.36 2e-25 Receptor-like serine/threonine-protein kinase SD1-8 OS Arabidopsis thaliana GN SD18 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZT07|RKS1_ARATH 2 163 + 162 Gaps:11 20.29 833 34.91 4e-24 G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS Arabidopsis thaliana GN RKS1 PE 3 SV 3
blastp_uniprot_sprot sp|P22553|SLSG2_BRAOA 9 163 + 155 Gaps:14 36.55 435 33.96 2e-23 S-locus-specific glycoprotein BS29-2 OS Brassica oleracea var. alboglabra GN SLSG PE 2 SV 1
blastp_uniprot_sprot sp|O64477|Y2913_ARATH 3 150 + 148 Gaps:12 18.84 828 30.13 4e-23 G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS Arabidopsis thaliana GN At2g19130 PE 2 SV 1
rpsblast_cdd gnl|CDD|201524 8 111 + 104 Gaps:10 100.00 110 37.27 3e-24 pfam00954 S_locus_glycop S-locus glycoprotein family. In Brassicaceae self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins as well as S-receptor kinases are in linkage with the S-alleles.

1 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 8 111 104 PF00954 none S-locus glycoprotein family IPR000858

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5

0 Targeting