Protein : Qrob_P0064590.2 Q. robur
Protein Identifier  ? Qrob_P0064590.2 Organism . Name  Quercus robur
Score  59.0 Score Type  egn
Protein Description  (M=2) KOG3491 - Predicted membrane protein [Function unknown]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 106  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005783 endoplasmic reticulum The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).

11 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|dosa:Os11t0637501-00 23 59 + 37 none 54.41 68 81.08 2e-12 Os11g0637501 Similar to membrane protein.
blastp_kegg lcl|sita:101758355 21 64 + 44 none 11.22 392 70.45 2e-12 uncharacterized LOC101758355
blastp_kegg lcl|pda:103714921 23 59 + 37 none 54.41 68 78.38 2e-12 stress-associated endoplasmic reticulum protein 2-like
blastp_kegg lcl|sbi:SORBI_05g025380 23 62 + 40 none 58.82 68 75.00 3e-12 SORBIDRAFT_05g025380 Sb05g025380 hypothetical protein
blastp_kegg lcl|vvi:100853914 23 62 + 40 none 58.82 68 75.00 3e-12 stress-associated endoplasmic reticulum protein 2-like
blastp_kegg lcl|sita:101760659 23 62 + 40 none 58.82 68 75.00 3e-12 stress-associated endoplasmic reticulum protein 2-like
blastp_kegg lcl|pop:POPTR_0006s01810g 23 59 + 37 none 36.27 102 83.78 3e-12 POPTRDRAFT_717321 hypothetical protein
blastp_kegg lcl|sita:101754179 23 62 + 40 none 58.82 68 75.00 4e-12 stress-associated endoplasmic reticulum protein 2-like
blastp_kegg lcl|dosa:Os12t0514100-01 23 59 + 37 none 54.41 68 81.08 4e-12 Os12g0514100 Ribosome associated membrane RAMP4 family protein.
blastp_kegg lcl|osa:4352336 23 59 + 37 none 54.41 68 81.08 4e-12 Os12g0514100
rpsblast_kog gnl|CDD|38701 23 58 + 36 none 55.38 65 52.78 7e-07 KOG3491 KOG3491 KOG3491 Predicted membrane protein [Function unknown].

1 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 25 59 35 PF06624 none Ribosome associated membrane protein RAMP4 IPR010580

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5

0 Targeting