Protein : Qrob_P0064160.2 Q. robur
Protein Identifier  ? Qrob_P0064160.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) KOG0078//KOG0080//KOG0084//KOG0086//KOG0087//KOG0088//KOG0092//KOG0094//KOG0097//KOG0098 - GTP-binding protein SEC4 small G protein superfamily and related Ras family GTP-binding proteins [Signal transduction mechanisms Intracellular trafficking secretion and vesicular transport]. // GTPase Rab18 small G protein superfamily [General function prediction only]. // GTPase Rab1/YPT1 small G protein superfamily and related GTP-binding proteins [Signal transduction mechanisms Intracellular trafficking secretion and vesicular transport]. // GTPase Rab4 small G protein superfamily [Intracellular trafficking secretion and vesicular transport]. // GTPase Rab11/YPT3 small G protein superfamily [Intracellular trafficking secretion and vesicular transport]. // GTPase Rab21 small G protein superfamily [General function prediction only]. // GTPase Rab5/YPT51 and related small G protein superfamily GTPases [Intracellular trafficking secretion and vesicular transport]. // GTPase Rab6/YPT6/Ryh1 small G protein superfamily [Intracellular trafficking secretion and vesicular transport]. // GTPase Rab14 small G protein superfamily [Intracellular trafficking secretion and vesicular transport]. // GTPase Rab2 small G protein superfamily [Intracellular trafficking secretion and vesicular transport]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 155  
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0015031 protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0007264 small GTPase mediated signal transduction Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100258211 5 142 + 138 none 69.00 200 92.03 3e-88 ras-related protein Rab5-like
blastp_kegg lcl|mtr:MTR_3g064390 5 142 + 138 none 69.00 200 90.58 1e-87 GTP binding protein
blastp_kegg lcl|gmx:100810011 5 142 + 138 none 69.00 200 90.58 6e-87 ras-related protein RHN1-like
blastp_kegg lcl|cam:101489102 5 142 + 138 none 69.00 200 89.86 1e-86 ras-related protein RHN1-like
blastp_kegg lcl|pvu:PHAVU_006G086000g 5 142 + 138 none 69.00 200 90.58 2e-86 hypothetical protein
blastp_kegg lcl|gmx:100791620 5 142 + 138 none 69.00 200 89.86 4e-86 ras-related protein RHN1-like
blastp_kegg lcl|mtr:MTR_5g076590 5 142 + 138 none 69.00 200 89.86 2e-85 GTP binding protein
blastp_kegg lcl|cam:101512595 5 142 + 138 none 69.00 200 89.13 7e-85 ras-related protein RHN1-like
blastp_kegg lcl|pda:103723680 6 138 + 133 none 66.50 200 90.98 1e-83 ras-related protein Rab5-like
blastp_kegg lcl|pda:103717597 5 138 + 134 none 67.00 200 90.30 1e-83 ras-related protein RHN1
blastp_pdb 2efh_D 8 138 + 131 none 72.38 181 87.02 1e-79 mol:protein length:181 Small GTP-binding protein-like
blastp_pdb 2efh_B 8 138 + 131 none 72.38 181 87.02 1e-79 mol:protein length:181 Small GTP-binding protein-like
blastp_pdb 2efe_D 8 138 + 131 none 72.38 181 87.02 1e-79 mol:protein length:181 Small GTP-binding protein-like
blastp_pdb 2efe_B 8 138 + 131 none 72.38 181 87.02 1e-79 mol:protein length:181 Small GTP-binding protein-like
blastp_pdb 2efd_D 8 138 + 131 none 72.38 181 87.02 1e-79 mol:protein length:181 Small GTP-binding protein-like
blastp_pdb 2efd_B 8 138 + 131 none 72.38 181 87.02 1e-79 mol:protein length:181 Small GTP-binding protein-like
blastp_pdb 2efc_D 8 138 + 131 none 72.38 181 87.02 1e-79 mol:protein length:181 Small GTP-binding protein-like
blastp_pdb 2efc_B 8 138 + 131 none 72.38 181 87.02 1e-79 mol:protein length:181 Small GTP-binding protein-like
blastp_pdb 1r2q_A 14 135 + 122 none 71.76 170 77.05 1e-66 mol:protein length:170 Ras-related protein Rab-5A
blastp_pdb 1n6h_A 14 135 + 122 none 71.76 170 77.05 1e-66 mol:protein length:170 Ras-related protein Rab-5A
blastp_uniprot_sprot sp|P31583|RHN1_NICPL 1 138 + 138 Gaps:2 68.00 200 88.97 1e-85 Ras-related protein RHN1 OS Nicotiana plumbaginifolia GN RHN1 PE 2 SV 1
blastp_uniprot_sprot sp|P29687|RAB5_TOBAC 8 138 + 131 none 65.50 200 90.84 2e-84 Ras-related protein Rab5 OS Nicotiana tabacum GN RAB5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SN68|RAF2B_ARATH 8 138 + 131 none 65.50 200 87.02 2e-79 Ras-related protein RABF2b OS Arabidopsis thaliana GN RABF2B PE 1 SV 1
blastp_uniprot_sprot sp|P31582|RAF2A_ARATH 12 142 + 131 none 65.50 200 86.26 2e-78 Ras-related protein RABF2a OS Arabidopsis thaliana GN RABF2A PE 1 SV 1
blastp_uniprot_sprot sp|Q06AU6|RAB5A_PIG 14 135 + 122 none 56.74 215 77.05 8e-66 Ras-related protein Rab-5A OS Sus scrofa GN RAB5A PE 2 SV 1
blastp_uniprot_sprot sp|Q0IIG7|RAB5A_BOVIN 14 135 + 122 none 56.74 215 77.05 1e-65 Ras-related protein Rab-5A OS Bos taurus GN RAB5A PE 2 SV 1
blastp_uniprot_sprot sp|P61271|RAB5A_MACFA 14 135 + 122 none 56.74 215 77.05 1e-65 Ras-related protein Rab-5A OS Macaca fascicularis GN RAB5A PE 2 SV 1
blastp_uniprot_sprot sp|P20339|RAB5A_HUMAN 14 135 + 122 none 56.74 215 77.05 1e-65 Ras-related protein Rab-5A OS Homo sapiens GN RAB5A PE 1 SV 2
blastp_uniprot_sprot sp|P18066|RAB5A_CANFA 14 135 + 122 none 56.74 215 77.05 1e-65 Ras-related protein Rab-5A OS Canis familiaris GN RAB5A PE 1 SV 1
blastp_uniprot_sprot sp|Q9CQD1|RAB5A_MOUSE 14 135 + 122 none 56.74 215 77.05 1e-65 Ras-related protein Rab-5A OS Mus musculus GN Rab5a PE 1 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 8 154 147 PS51419 none small GTPase Rab1 family profile. none
SMART 13 153 141 SM00175 none Rab subfamily of small GTPases IPR003579
PANTHER 9 133 125 PTHR24073 none none none
SMART 15 147 133 SM00174 "Reactome:REACT_11044" Rho (Ras homology) subfamily of Ras-like small GTPases IPR003578
PRINTS 13 34 22 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 54 76 23 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 36 52 17 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 116 129 14 PR00449 none Transforming protein P21 ras signature IPR001806
TIGRFAM 12 139 128 TIGR00231 none small_GTP: small GTP-binding protein domain IPR005225
SMART 10 146 137 SM00173 none Ras subfamily of RAS small GTPases IPR020849
Pfam 14 139 126 PF00071 none Ras family IPR001806
PANTHER 9 133 125 PTHR24073:SF372 none none none
SUPERFAMILY 10 139 130 SSF52540 none none IPR027417
Gene3D 9 141 133 G3DSA:3.40.50.300 none none IPR027417

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03

0 Targeting