Protein : Qrob_P0062560.2 Q. robur
Protein Identifier  ? Qrob_P0062560.2 Organism . Name  Quercus robur
Score  42.0 Score Type  egn
Protein Description  (M=1) KOG1705 - Uncharacterized conserved protein contains CXXC motifs [Function unknown]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 367  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10024823mg 16 236 + 221 none 26.76 826 66.52 8e-94 hypothetical protein
blastp_kegg lcl|cit:102614026 16 235 + 220 none 23.71 928 66.36 7e-93 muscle M-line assembly protein unc-89-like
blastp_kegg lcl|rcu:RCOM_0470870 16 236 + 221 none 34.80 635 64.25 2e-90 hypothetical protein
blastp_kegg lcl|fve:101296742 14 228 + 215 none 22.37 961 63.72 5e-85 uncharacterized protein LOC101296742
blastp_kegg lcl|tcc:TCM_027420 1 228 + 228 Gaps:7 26.98 819 69.23 2e-84 Chloroplast-like protein isoform 1
blastp_kegg lcl|gmx:100790092 14 228 + 215 none 23.45 917 60.93 3e-84 dentin sialophosphoprotein-like
blastp_kegg lcl|cmo:103500024 25 250 + 226 Gaps:1 84.07 270 58.59 9e-84 sister chromatid cohesion protein PDS5 homolog B-B-like
blastp_kegg lcl|pper:PRUPE_ppa001087mg 14 239 + 226 none 24.78 912 59.29 2e-83 hypothetical protein
blastp_kegg lcl|pop:POPTR_0006s27920g 14 228 + 215 none 30.58 703 59.53 5e-83 hypothetical protein
blastp_kegg lcl|fve:101302469 15 265 + 251 Gaps:6 25.91 992 54.86 1e-82 uncharacterized protein LOC101302469
blastp_pdb 2k0a_A 258 360 + 103 Gaps:1 95.41 109 57.69 1e-34 mol:protein length:109 Pre-mRNA-splicing factor RDS3
blastp_uniprot_sprot sp|Q0WMV8|PHF5B_ARATH 257 366 + 110 none 100.00 110 99.09 2e-76 PHD finger-like domain-containing protein 5B OS Arabidopsis thaliana GN At1g07170 PE 2 SV 1
blastp_uniprot_sprot sp|P0DI19|PHF5A_ARATH 257 366 + 110 none 100.00 110 99.09 2e-76 PHD finger-like domain-containing protein 5A OS Arabidopsis thaliana GN At2g30000 PE 3 SV 1
blastp_uniprot_sprot sp|P83871|PHF5A_RAT 257 366 + 110 none 100.00 110 91.82 9e-71 PHD finger-like domain-containing protein 5A OS Rattus norvegicus GN Phf5a PE 2 SV 1
blastp_uniprot_sprot sp|P83870|PHF5A_MOUSE 257 366 + 110 none 100.00 110 91.82 9e-71 PHD finger-like domain-containing protein 5A OS Mus musculus GN Phf5a PE 1 SV 1
blastp_uniprot_sprot sp|Q7RTV0|PHF5A_HUMAN 257 366 + 110 none 100.00 110 91.82 9e-71 PHD finger-like domain-containing protein 5A OS Homo sapiens GN PHF5A PE 1 SV 1
blastp_uniprot_sprot sp|Q9VMC8|PHF5_DROME 257 365 + 109 none 98.20 111 89.91 6e-68 Uncharacterized protein CG9548 OS Drosophila melanogaster GN CG9548 PE 3 SV 2
blastp_uniprot_sprot sp|Q9UTB8|INI1_SCHPO 257 361 + 105 none 89.74 117 68.57 1e-51 Pre-mRNA-splicing factor ini1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN ini1 PE 3 SV 1
blastp_uniprot_sprot sp|Q06835|RDS3_YEAST 257 360 + 104 Gaps:1 98.13 107 58.10 3e-35 Pre-mRNA-splicing factor RDS3 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN RDS3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9HFF5|PDS5_SCHPO 61 207 + 147 Gaps:1 12.28 1205 29.73 6e-16 Sister chromatid cohesion protein pds5 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN pds5 PE 1 SV 1
blastp_uniprot_sprot sp|Q6A026|PDS5A_MOUSE 34 240 + 207 Gaps:3 15.62 1332 24.52 6e-14 Sister chromatid cohesion protein PDS5 homolog A OS Mus musculus GN Pds5a PE 3 SV 3
rpsblast_cdd gnl|CDD|146345 258 362 + 105 none 100.00 105 71.43 5e-54 pfam03660 PHF5 PHF5-like protein. This family of proteins the superfamily of PHD-finger proteins. At least one example from mouse may act as a chromatin-associated protein. The S. pombe ini1 gene is essential required for splicing. It is localised in the nucleus but not detected in the nucleolus and can be complemented by human ini1.
rpsblast_kog gnl|CDD|36917 257 366 + 110 none 100.00 110 95.45 1e-57 KOG1705 KOG1705 KOG1705 Uncharacterized conserved protein contains CXXC motifs [Function unknown].
rpsblast_kog gnl|CDD|36738 18 266 + 249 Gaps:37 36.57 1266 31.97 2e-37 KOG1525 KOG1525 KOG1525 Sister chromatid cohesion complex Cohesin subunit PDS5 [Cell cycle control cell division chromosome partitioning].

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 41 219 179 SSF48371 none none IPR016024
PANTHER 161 366 206 PTHR13120 none none IPR005345
Pfam 257 360 104 PF03660 none PHF5-like protein IPR005345
Coils 35 56 22 Coil none none none

0 Localization

0 Qtllist

0 Targeting