Protein : Qrob_P0061530.2 Q. robur
Protein Identifier  ? Qrob_P0061530.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=5) K11968 - ariadne-1 Code Enzyme  EC:6.3.2.19
Gene Prediction Quality  validated Protein length 

Sequence

Length: 612  
Kegg Orthology  K11968
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0004842 ubiquitin-protein transferase activity Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
GO:0016567 protein ubiquitination The process in which one or more ubiquitin groups are added to a protein.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pvu:PHAVU_005G152000g 1 611 + 611 Gaps:25 100.00 590 84.24 0.0 hypothetical protein
blastp_kegg lcl|gmx:100784195 1 611 + 611 Gaps:31 100.00 586 81.40 0.0 ARI1 probable E3 ubiquitin-protein ligase ARI8-like
blastp_kegg lcl|gmx:100810427 1 611 + 611 Gaps:26 100.00 589 83.36 0.0 probable E3 ubiquitin-protein ligase ARI7-like
blastp_kegg lcl|gmx:100793295 1 611 + 611 Gaps:26 100.00 589 83.36 0.0 ARI3 probable E3 ubiquitin-protein ligase ARI7-like
blastp_kegg lcl|cam:101493018 1 610 + 610 Gaps:30 100.00 588 80.10 0.0 probable E3 ubiquitin-protein ligase ARI7-like
blastp_kegg lcl|gmx:100795162 1 611 + 611 Gaps:31 100.00 586 80.55 0.0 ARI2 probable E3 ubiquitin-protein ligase ARI7-like
blastp_kegg lcl|cam:101512761 1 611 + 611 Gaps:25 100.00 590 82.71 0.0 probable E3 ubiquitin-protein ligase ARI7-like
blastp_kegg lcl|vvi:100262873 1 610 + 610 Gaps:28 99.83 587 80.20 0.0 probable E3 ubiquitin-protein ligase ARI7-like
blastp_kegg lcl|pvu:PHAVU_011G055500g 1 611 + 611 Gaps:29 100.00 588 78.57 0.0 hypothetical protein
blastp_kegg lcl|vvi:100257000 1 610 + 610 Gaps:29 90.03 652 79.22 0.0 probable E3 ubiquitin-protein ligase ARI8-like
blastp_pdb 1wd2_A 310 368 + 59 Gaps:4 95.00 60 59.65 4e-13 mol:protein length:60 Ariadne-1 protein homolog
blastp_uniprot_sprot sp|Q84RR0|ARI7_ARATH 1 585 + 585 Gaps:27 100.00 562 74.38 0.0 Probable E3 ubiquitin-protein ligase ARI7 OS Arabidopsis thaliana GN ARI7 PE 2 SV 1
blastp_uniprot_sprot sp|Q8W468|ARI8_ARATH 16 610 + 595 Gaps:30 99.65 567 73.27 0.0 Probable E3 ubiquitin-protein ligase ARI8 OS Arabidopsis thaliana GN ARI8 PE 2 SV 1
blastp_uniprot_sprot sp|Q8L829|ARI5_ARATH 52 553 + 502 Gaps:3 90.40 552 71.94 0.0 Probable E3 ubiquitin-protein ligase ARI5 OS Arabidopsis thaliana GN ARI5 PE 2 SV 1
blastp_uniprot_sprot sp|P0C8K8|ARI6_ARATH 61 577 + 517 Gaps:9 93.12 552 67.32 0.0 Putative E3 ubiquitin-protein ligase ARI6 OS Arabidopsis thaliana GN ARI6 PE 5 SV 1
blastp_uniprot_sprot sp|Q9SKC3|ARI9_ARATH 66 557 + 492 Gaps:25 89.32 543 58.35 0.0 Probable E3 ubiquitin-protein ligase ARI9 OS Arabidopsis thaliana GN ARI9 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SKC2|ARI11_ARATH 1 564 + 564 Gaps:42 98.89 542 54.85 0.0 Probable E3 ubiquitin-protein ligase ARI11 OS Arabidopsis thaliana GN ARI11 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SKC4|ARI10_ARATH 51 543 + 493 Gaps:22 92.02 514 58.35 0.0 Probable E3 ubiquitin-protein ligase ARI10 OS Arabidopsis thaliana GN ARI10 PE 2 SV 1
blastp_uniprot_sprot sp|Q84RQ9|ARI12_ARATH 77 550 + 474 Gaps:37 92.54 496 42.05 1e-106 Probable E3 ubiquitin-protein ligase ARI12 OS Arabidopsis thaliana GN ARI12 PE 2 SV 2
blastp_uniprot_sprot sp|Q6T486|RBRA_DICDI 36 546 + 511 Gaps:37 98.46 520 34.96 2e-93 Probable E3 ubiquitin-protein ligase rbrA OS Dictyostelium discoideum GN rbrA PE 3 SV 1
blastp_uniprot_sprot sp|Q9P3U4|YKX2_SCHPO 46 498 + 453 Gaps:35 87.70 504 34.39 1e-72 Uncharacterized RING finger protein C328.02 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC328.02 PE 3 SV 1
rpsblast_cdd gnl|CDD|128895 229 291 + 63 Gaps:1 100.00 64 42.19 5e-15 smart00647 IBR In Between Ring fingers. the domains occurs between pairs og RING fingers.
rpsblast_cdd gnl|CDD|201821 229 291 + 63 Gaps:2 100.00 63 34.92 2e-10 pfam01485 IBR IBR domain. The IBR (In Between Ring fingers) domain is often found to occur between pairs of ring fingers (pfam00097). This domain has also been called the C6HC domain and DRIL (for double RING finger linked) domain. Proteins that contain two Ring fingers and an IBR domain (these proteins are also termed RBR family proteins) are thought to exist in all eukaryotic organisms. RBR family members play roles in protein quality control and can indirectly regulate transcription. Evidence suggests that RBR proteins are often parts of cullin-containing ubiquitin ligase complexes. The ubiquitin ligase Parkin is an RBR family protein whose mutations are involved in forms of familial Parkinson's disease.
rpsblast_kog gnl|CDD|37026 84 548 + 465 Gaps:26 99.77 444 45.82 1e-117 KOG1815 KOG1815 KOG1815 Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|37023 159 363 + 205 Gaps:12 53.39 384 26.34 2e-27 KOG1812 KOG1812 KOG1812 Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|37025 135 351 + 217 Gaps:33 54.38 445 26.03 6e-22 KOG1814 KOG1814 KOG1814 Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|35230 154 352 + 199 Gaps:37 48.88 446 29.82 3e-16 KOG0006 KOG0006 KOG0006 E3 ubiquitin-protein ligase (Parkin protein) [Posttranslational modification protein turnover chaperones].

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 156 214 59 G3DSA:3.30.40.10 none none IPR013083
ProSiteProfiles 579 611 33 PS50199 none Zinc finger RanBP2 type profile. IPR001876
SUPERFAMILY 229 298 70 SSF57850 none none none
PANTHER 14 611 598 PTHR11685 "UniPathway:UPA00143";signature_desc=RBR FAMILY (RING FINGER AND IBR DOMAIN-CONTAINING) none IPR031127
SUPERFAMILY 156 241 86 SSF57850 none none none
PANTHER 14 611 598 PTHR11685:SF10 none none none
ProSiteProfiles 160 204 45 PS50089 none Zinc finger RING-type profile. IPR001841
SUPERFAMILY 310 358 49 SSF57850 none none none
Pfam 229 291 63 PF01485 none IBR domain IPR002867
Pfam 309 356 48 PF01485 none IBR domain IPR002867
ProSitePatterns 587 606 20 PS01358 none Zinc finger RanBP2-type signature. IPR001876
Coils 370 398 29 Coil none none none
SMART 295 365 71 SM00647 none In Between Ring fingers IPR002867
SMART 229 291 63 SM00647 none In Between Ring fingers IPR002867
SUPERFAMILY 583 610 28 SSF90209 none none none

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting