Protein : Qrob_P0061340.2 Q. robur
Protein Identifier  ? Qrob_P0061340.2 Organism . Name  Quercus robur
Protein Description  (M=21) PF13947//PF14380 - Wall-associated receptor kinase galacturonan-binding // Wall-associated receptor kinase C-terminal Alias (in v1)  Qrob_P0822190.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 255  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0030247 polysaccharide binding Interacting selectively and non-covalently with any polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.

14 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100811407 5 247 + 243 Gaps:9 34.25 730 44.40 1e-62 probable serine/threonine-protein kinase At1g18390-like
blastp_kegg lcl|mdm:103444142 1 246 + 246 Gaps:12 93.23 266 42.74 1e-59 probable receptor-like protein kinase At1g67000
blastp_kegg lcl|pper:PRUPE_ppb020170mg 4 247 + 244 Gaps:12 85.23 298 42.13 4e-58 hypothetical protein
blastp_kegg lcl|pop:POPTR_0005s15300g 14 247 + 234 Gaps:12 92.37 262 42.98 2e-57 hypothetical protein
blastp_kegg lcl|pop:POPTR_0004s09610g 1 247 + 247 Gaps:14 37.44 681 43.14 3e-57 hypothetical protein
blastp_kegg lcl|pmum:103328636 4 247 + 244 Gaps:12 36.44 697 43.70 1e-56 probable serine/threonine-protein kinase At1g18390
blastp_kegg lcl|mdm:103416165 1 246 + 246 Gaps:12 88.57 280 41.53 7e-56 probable receptor-like protein kinase At1g67000
blastp_kegg lcl|pxb:103936625 1 246 + 246 Gaps:12 91.51 271 42.74 4e-55 probable receptor-like protein kinase At1g67000
blastp_kegg lcl|pop:POPTR_0004s09580g 1 247 + 247 Gaps:36 49.14 928 40.57 1e-54 POPTRDRAFT_758970 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_008G007900g 11 247 + 237 Gaps:14 34.41 683 45.11 1e-54 hypothetical protein
blastp_uniprot_sprot sp|Q3ECH2|Y1670_ARATH 22 249 + 228 Gaps:45 48.43 892 31.48 2e-25 Probable receptor-like protein kinase At1g67000 OS Arabidopsis thaliana GN At1g67000 PE 2 SV 2
blastp_uniprot_sprot sp|P0C5E2|Y1839_ARATH 25 246 + 222 Gaps:17 33.49 654 29.22 2e-17 Probable serine/threonine-protein kinase At1g18390 OS Arabidopsis thaliana GN At1g18390 PE 2 SV 2
blastp_uniprot_sprot sp|Q5BQ05|Y1838_ARATH 23 246 + 224 Gaps:25 86.00 250 27.91 4e-13 Uncharacterized protein At1g18380 OS Arabidopsis thaliana GN At1g18380 PE 2 SV 1
rpsblast_cdd gnl|CDD|206548 154 246 + 93 Gaps:7 93.62 94 34.09 2e-13 pfam14380 WAK_assoc Wall-associated receptor kinase C-terminal. This WAK_assoc domain is cysteine-rich and lies C-terminal to the binding domain GUB_WAK_bind pfam13947.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 40 141 102 PF13947 none Wall-associated receptor kinase galacturonan-binding IPR025287
Phobius 11 21 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 30 254 225 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 22 29 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 29 29 SIGNAL_PEPTIDE none Signal peptide region none
Pfam 154 247 94 PF14380 none Wall-associated receptor kinase C-terminal none
Phobius 1 10 10 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none

2 Localization

Analysis Start End Length
SignalP_EUK 1 29 28
SignalP_GRAM_POSITIVE 1 29 28

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 29   Secretory pathway 1 0.965 0.011 NON-PLANT 29