Protein : Qrob_P0060000.2 Q. robur
Protein Identifier  ? Qrob_P0060000.2 Organism . Name  Quercus robur
Score  95.0 Score Type  egn
Protein Description  (M=43) KOG0244 - Kinesin-like protein [Cytoskeleton]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 412  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003777 microtubule motor activity Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
GO:0007018 microtubule-based movement A microtubule-based process that is mediated by motor proteins and results in the movement of organelles, other microtubules, or other particles along microtubules.
GO:0005871 kinesin complex Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work.

11 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101297025 214 394 + 181 Gaps:11 13.27 1040 73.91 1e-21 chromosome-associated kinesin KIF4A-like
blastp_kegg lcl|rcu:RCOM_1589540 179 394 + 216 Gaps:22 15.56 1067 71.08 2e-21 Kinesin heavy chain putative
blastp_kegg lcl|pop:POPTR_0014s02470g 179 394 + 216 Gaps:17 15.14 1050 69.18 6e-21 hypothetical protein
blastp_kegg lcl|pop:POPTR_0002s12500g 179 394 + 216 Gaps:17 15.26 1055 68.94 7e-21 POPTRDRAFT_754950 hypothetical protein
blastp_kegg lcl|mdm:103441093 214 394 + 181 Gaps:11 11.09 1154 78.91 8e-21 chromosome-associated kinesin KIF4A-like
blastp_kegg lcl|pxb:103950503 214 394 + 181 Gaps:11 12.31 1040 78.12 1e-20 chromosome-associated kinesin KIF4A
blastp_kegg lcl|pper:PRUPE_ppa000680mg 179 394 + 216 Gaps:17 15.24 1037 68.35 2e-20 hypothetical protein
blastp_kegg lcl|pmum:103320364 179 394 + 216 Gaps:21 14.91 1033 64.94 2e-20 chromosome-associated kinesin KIF4A-like
blastp_kegg lcl|mdm:103455939 214 394 + 181 Gaps:11 12.50 1040 76.15 2e-20 chromosome-associated kinesin KIF4A-like
blastp_kegg lcl|vvi:100255840 214 394 + 181 Gaps:16 12.61 1071 76.30 4e-20 chromosome-associated kinesin KIF4A-like
rpsblast_kog gnl|CDD|35465 206 286 + 81 Gaps:14 7.56 913 40.58 9e-09 KOG0244 KOG0244 KOG0244 Kinesin-like protein [Cytoskeleton].

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 249 270 22 Coil none none none
Phobius 133 151 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 289 393 105 PTHR24115:SF277 none none none
Phobius 152 411 260 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 289 393 105 PTHR24115 none none IPR027640
Phobius 128 132 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 235 273 39 PTHR24115:SF277 none none none
Phobius 102 107 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 82 101 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 108 127 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 81 81 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 235 273 39 PTHR24115 none none IPR027640

1 Localization

Analysis Start End Length
TMHMM 108 130 22

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting