Protein : Qrob_P0059730.2 Q. robur
Protein Identifier  ? Qrob_P0059730.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=53) PF00954//PF01453//PF08276 - S-locus glycoprotein family // D-mannose binding lectin // PAN-like domain Code Enzyme  EC:2.7.11.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 588  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0048544 recognition of pollen The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species.

25 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa001576mg 37 568 + 532 Gaps:32 68.09 799 53.12 5e-151 hypothetical protein
blastp_kegg lcl|tcc:TCM_034779 28 568 + 541 Gaps:31 69.32 805 50.90 4e-150 S-locus lectin protein kinase family protein putative
blastp_kegg lcl|pxb:103950605 8 571 + 564 Gaps:29 70.39 797 51.34 2e-149 putative receptor protein kinase ZmPK1
blastp_kegg lcl|pmum:103320451 37 568 + 532 Gaps:32 70.47 772 52.39 4e-149 putative receptor protein kinase ZmPK1
blastp_kegg lcl|pop:POPTR_0013s08990g 25 573 + 549 Gaps:36 69.76 787 53.19 6e-148 POPTRDRAFT_571616 hypothetical protein
blastp_kegg lcl|vvi:100257449 29 571 + 543 Gaps:32 69.25 800 51.26 2e-147 putative receptor protein kinase ZmPK1-like
blastp_kegg lcl|pop:POPTR_0090s00200g 25 573 + 549 Gaps:35 69.72 786 52.37 2e-146 hypothetical protein
blastp_kegg lcl|mdm:103455936 32 571 + 540 Gaps:28 66.67 798 52.07 2e-143 putative receptor protein kinase ZmPK1
blastp_kegg lcl|mdm:103424672 1 571 + 571 Gaps:31 70.18 798 51.25 3e-143 putative receptor protein kinase ZmPK1
blastp_kegg lcl|fve:101312026 6 568 + 563 Gaps:34 70.54 801 49.91 4e-143 putative receptor protein kinase ZmPK1-like
blastp_uniprot_sprot sp|P17801|KPRO_MAIZE 8 415 + 408 Gaps:35 51.04 817 37.17 7e-72 Putative receptor protein kinase ZmPK1 OS Zea mays GN PK1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FLV4|Y5248_ARATH 5 397 + 393 Gaps:65 49.31 872 31.16 2e-34 G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS Arabidopsis thaliana GN At5g24080 PE 2 SV 1
blastp_uniprot_sprot sp|P0DH87|PSRK_ARATH 24 384 + 361 Gaps:45 68.50 546 29.41 1e-30 Putative inactive G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS Arabidopsis thaliana GN PSEUDOSRKA PE 5 SV 1
blastp_uniprot_sprot sp|P93756|SD31_ARATH 24 406 + 383 Gaps:44 51.18 764 32.23 3e-30 G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 OS Arabidopsis thaliana GN SD31 PE 3 SV 1
blastp_uniprot_sprot sp|O64477|Y2913_ARATH 43 384 + 342 Gaps:51 43.12 828 28.85 5e-30 G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS Arabidopsis thaliana GN At2g19130 PE 2 SV 1
blastp_uniprot_sprot sp|P0DH86|SRK_ARATH 24 384 + 361 Gaps:45 43.85 853 29.14 6e-30 G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS Arabidopsis thaliana GN SRK PE 2 SV 1
blastp_uniprot_sprot sp|Q9LPZ3|Y1141_ARATH 41 410 + 370 Gaps:28 46.39 845 26.53 8e-30 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 OS Arabidopsis thaliana GN At1g11410 PE 3 SV 3
blastp_uniprot_sprot sp|P17840|SLSG3_BRAOL 7 407 + 401 Gaps:65 95.17 435 30.68 1e-29 S-locus-specific glycoprotein S13 OS Brassica oleracea GN SLSG PE 2 SV 2
blastp_uniprot_sprot sp|O81906|B120_ARATH 38 371 + 334 Gaps:40 41.70 849 29.66 5e-28 G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS Arabidopsis thaliana GN B120 PE 1 SV 1
blastp_uniprot_sprot sp|Q39203|SD22_ARATH 30 371 + 342 Gaps:35 44.29 797 28.33 2e-27 G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 OS Arabidopsis thaliana GN SD22 PE 1 SV 1
rpsblast_cdd gnl|CDD|201803 71 175 + 105 Gaps:8 100.00 109 45.87 6e-24 pfam01453 B_lectin D-mannose binding lectin. These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria.
rpsblast_cdd gnl|CDD|128418 43 148 + 106 Gaps:5 92.11 114 44.76 1e-19 smart00108 B_lectin Bulb-type mannose-specific lectin.
rpsblast_cdd gnl|CDD|28910 43 149 + 107 Gaps:6 92.24 116 42.99 4e-18 cd00028 B_lectin Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes such as cell-cell and host-pathogen interactions serum glycoprotein turnover and innate immune responses..
rpsblast_cdd gnl|CDD|29032 320 408 + 89 Gaps:11 100.00 84 33.33 9e-09 cd01098 PAN_AP_plant Plant PAN/APPLE-like domain present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica one of probably many molecular mechanisms by which hermaphrodite flowering plants avoid self-fertilization..
rpsblast_kog gnl|CDD|36401 488 573 + 86 Gaps:7 22.99 361 34.94 1e-11 KOG1187 KOG1187 KOG1187 Serine/threonine protein kinase [Signal transduction mechanisms].

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 6 16 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
SUPERFAMILY 63 192 130 SSF51110 none none IPR001480
Phobius 467 587 121 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 17 20 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 21 441 421 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSiteProfiles 28 147 120 PS50927 none Bulb-type lectin domain profile. IPR001480
SMART 34 149 116 SM00108 none Bulb-type mannose-specific lectin IPR001480
Gene3D 31 155 125 G3DSA:2.90.10.10 none none IPR001480
Phobius 1 20 20 SIGNAL_PEPTIDE none Signal peptide region none
Pfam 72 173 102 PF01453 none D-mannose binding lectin IPR001480
Pfam 240 308 69 PF00954 none S-locus glycoprotein family IPR000858
ProSiteProfiles 324 408 85 PS50948 none PAN/Apple domain profile. IPR003609
Phobius 1 5 5 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 442 466 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 324 389 66 PF08276 none PAN-like domain IPR013227
PANTHER 17 486 470 PTHR32444 none none none

3 Localization

Analysis Start End Length
TMHMM 444 466 22
SignalP_EUK 1 20 19
TMHMM 7 26 19

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 20   Secretory pathway 1 0.966 0.053 NON-PLANT 20