Protein : Qrob_P0059670.2 Q. robur
Protein Identifier  ? Qrob_P0059670.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=53) PF00954//PF01453//PF08276 - S-locus glycoprotein family // D-mannose binding lectin // PAN-like domain Code Enzyme  EC:2.7.11.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 540  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0048544 recognition of pollen The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species.

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa001576mg 9 536 + 528 Gaps:35 76.22 799 53.37 5e-174 hypothetical protein
blastp_kegg lcl|pmum:103320451 9 536 + 528 Gaps:26 70.98 772 55.66 2e-171 putative receptor protein kinase ZmPK1
blastp_kegg lcl|pxb:103950605 1 536 + 536 Gaps:23 69.26 797 53.99 2e-169 putative receptor protein kinase ZmPK1
blastp_kegg lcl|vvi:100260797 1 530 + 530 Gaps:26 68.69 792 55.88 5e-169 putative receptor protein kinase ZmPK1-like
blastp_kegg lcl|vvi:100257449 1 535 + 535 Gaps:22 68.88 800 54.26 1e-168 putative receptor protein kinase ZmPK1-like
blastp_kegg lcl|vvi:100247193 1 535 + 535 Gaps:22 68.79 801 54.26 3e-168 putative receptor protein kinase ZmPK1-like
blastp_kegg lcl|tcc:TCM_034779 1 536 + 536 Gaps:25 69.69 805 53.30 2e-166 S-locus lectin protein kinase family protein putative
blastp_kegg lcl|fve:101312026 1 536 + 536 Gaps:28 68.91 801 53.44 5e-166 putative receptor protein kinase ZmPK1-like
blastp_kegg lcl|mdm:103424672 1 530 + 530 Gaps:30 75.56 798 50.41 2e-165 putative receptor protein kinase ZmPK1
blastp_kegg lcl|mdm:103455936 1 530 + 530 Gaps:30 75.56 798 50.25 7e-165 putative receptor protein kinase ZmPK1
blastp_uniprot_sprot sp|P17801|KPRO_MAIZE 4 452 + 449 Gaps:48 59.36 817 36.29 2e-81 Putative receptor protein kinase ZmPK1 OS Zea mays GN PK1 PE 2 SV 2
blastp_uniprot_sprot sp|P0DH87|PSRK_ARATH 1 349 + 349 Gaps:34 67.58 546 29.81 9e-35 Putative inactive G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS Arabidopsis thaliana GN PSEUDOSRKA PE 5 SV 1
blastp_uniprot_sprot sp|P0DH86|SRK_ARATH 1 349 + 349 Gaps:34 43.26 853 29.81 6e-34 G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS Arabidopsis thaliana GN SRK PE 2 SV 1
blastp_uniprot_sprot sp|O81906|B120_ARATH 15 496 + 482 Gaps:82 54.65 849 28.88 2e-33 G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS Arabidopsis thaliana GN B120 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FLV4|Y5248_ARATH 4 362 + 359 Gaps:55 46.56 872 30.30 2e-31 G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS Arabidopsis thaliana GN At5g24080 PE 2 SV 1
blastp_uniprot_sprot sp|O64477|Y2913_ARATH 15 372 + 358 Gaps:42 46.38 828 29.95 2e-31 G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS Arabidopsis thaliana GN At2g19130 PE 2 SV 1
blastp_uniprot_sprot sp|P17840|SLSG3_BRAOL 1 338 + 338 Gaps:37 82.53 435 30.36 2e-29 S-locus-specific glycoprotein S13 OS Brassica oleracea GN SLSG PE 2 SV 2
blastp_uniprot_sprot sp|Q9SXB5|Y1135_ARATH 13 348 + 336 Gaps:51 44.27 820 29.48 3e-29 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11305 OS Arabidopsis thaliana GN At1g11305 PE 3 SV 1
blastp_uniprot_sprot sp|O81905|SD18_ARATH 1 345 + 345 Gaps:34 43.18 850 28.61 8e-29 Receptor-like serine/threonine-protein kinase SD1-8 OS Arabidopsis thaliana GN SD18 PE 1 SV 1
blastp_uniprot_sprot sp|O64781|Y1639_ARATH 15 340 + 326 Gaps:50 42.36 831 31.82 1e-27 G-type lectin S-receptor-like serine/threonine-protein kinase At1g61390 OS Arabidopsis thaliana GN At1g61390 PE 2 SV 1
rpsblast_cdd gnl|CDD|201803 43 145 + 103 Gaps:6 100.00 109 42.20 2e-23 pfam01453 B_lectin D-mannose binding lectin. These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria.
rpsblast_cdd gnl|CDD|28910 15 119 + 105 Gaps:4 92.24 116 39.25 6e-16 cd00028 B_lectin Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes such as cell-cell and host-pathogen interactions serum glycoprotein turnover and innate immune responses..
rpsblast_cdd gnl|CDD|128418 15 116 + 102 Gaps:3 90.35 114 40.78 7e-16 smart00108 B_lectin Bulb-type mannose-specific lectin.
rpsblast_cdd gnl|CDD|29032 290 373 + 84 Gaps:4 100.00 84 28.57 1e-08 cd01098 PAN_AP_plant Plant PAN/APPLE-like domain present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica one of probably many molecular mechanisms by which hermaphrodite flowering plants avoid self-fertilization..
rpsblast_cdd gnl|CDD|201524 193 278 + 86 Gaps:3 77.27 110 25.88 1e-07 pfam00954 S_locus_glycop S-locus glycoprotein family. In Brassicaceae self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins as well as S-receptor kinases are in linkage with the S-alleles.
rpsblast_kog gnl|CDD|36401 455 537 + 83 Gaps:7 22.16 361 33.75 1e-10 KOG1187 KOG1187 KOG1187 Serine/threonine protein kinase [Signal transduction mechanisms].

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 294 373 80 PS50948 none PAN/Apple domain profile. IPR003609
Gene3D 123 235 113 G3DSA:2.90.10.10 none none IPR001480
Phobius 1 409 409 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSiteProfiles 1 117 117 PS50927 none Bulb-type lectin domain profile. IPR001480
Pfam 193 278 86 PF00954 none S-locus glycoprotein family IPR000858
PANTHER 13 373 361 PTHR32444 none none none
SMART 6 119 114 SM00108 none Bulb-type mannose-specific lectin IPR001480
SUPERFAMILY 35 176 142 SSF51110 none none IPR001480
Pfam 296 350 55 PF08276 none PAN-like domain IPR013227
Phobius 410 434 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 44 144 101 PF01453 none D-mannose binding lectin IPR001480
Phobius 435 539 105 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 2 122 121 G3DSA:2.90.10.10 none none IPR001480

1 Localization

Analysis Start End Length
TMHMM 411 433 22

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting