Protein : Qrob_P0059000.2 Q. robur
Protein Identifier  ? Qrob_P0059000.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 232  
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0 Synonyms

0 GO Terms

11 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0015s10960g 1 231 + 231 Gaps:19 93.91 230 78.70 3e-112 POPTRDRAFT_575370 hypothetical protein
blastp_kegg lcl|vvi:100262841 19 231 + 213 Gaps:3 92.92 226 77.14 6e-109 thylakoid lumenal 17.9 kDa protein chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10032623mg 1 231 + 231 Gaps:11 100.00 236 75.00 8e-108 hypothetical protein
blastp_kegg lcl|cit:102617934 1 231 + 231 Gaps:11 100.00 236 75.00 8e-108 thylakoid lumenal 17.9 kDa protein chloroplastic-like
blastp_kegg lcl|rcu:RCOM_1505830 1 223 + 223 Gaps:1 96.94 229 75.23 2e-107 Thylakoid lumenal 17.9 kDa protein chloroplast precursor putative
blastp_kegg lcl|pxb:103964043 1 231 + 231 Gaps:6 97.84 232 71.81 1e-106 thylakoid lumenal 17.9 kDa protein chloroplastic
blastp_kegg lcl|mdm:103409647 6 231 + 226 Gaps:5 95.26 232 72.40 7e-106 thylakoid lumenal 17.9 kDa protein chloroplastic-like
blastp_kegg lcl|pmum:103338078 3 231 + 229 Gaps:7 98.68 227 75.45 3e-103 thylakoid lumenal 17.9 kDa protein chloroplastic
blastp_kegg lcl|tcc:TCM_014654 1 231 + 231 Gaps:6 99.12 227 74.67 4e-102 Thylakoid lumenal 17.9 kDa protein
blastp_kegg lcl|gmx:100817380 1 231 + 231 Gaps:9 99.55 223 72.52 1e-101 thylakoid lumenal 17.9 kDa protein chloroplastic-like
blastp_uniprot_sprot sp|Q9SW33|TL1Y_ARATH 1 231 + 231 Gaps:16 100.00 225 63.56 9e-89 Thylakoid lumenal 17.9 kDa protein chloroplastic OS Arabidopsis thaliana GN At4g24930 PE 1 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 2 2 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 3 11 9 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 17 231 215 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 12 16 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 16 16 SIGNAL_PEPTIDE none Signal peptide region none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting