Protein : Qrob_P0055580.2 Q. robur
Protein Identifier  ? Qrob_P0055580.2 Organism . Name  Quercus robur
Score  98.0 Score Type  egn
Protein Description  (M=3) PTHR11802//PTHR11802:SF17 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE // SUBFAMILY NOT NAMED Code Enzyme  EC:3.4.16.6
Gene Prediction Quality  validated Protein length 

Sequence

Length: 480  
Kegg Orthology  K16297
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO:0004185 serine-type carboxypeptidase activity Catalysis of the hydrolysis of a peptide bond not more than three residues from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0017s12960g 1 479 + 479 Gaps:13 100.00 468 83.12 0.0 POPTRDRAFT_668664 hypothetical protein
blastp_kegg lcl|vvi:100266848 1 479 + 479 Gaps:18 100.00 473 84.78 0.0 serine carboxypeptidase-like 25
blastp_kegg lcl|tcc:TCM_018765 1 479 + 479 Gaps:13 87.92 530 86.27 0.0 Serine carboxypeptidase-like 25 isoform 1
blastp_kegg lcl|pxb:103955701 1 479 + 479 Gaps:22 99.58 475 82.66 0.0 serine carboxypeptidase-like 25
blastp_kegg lcl|pop:POPTR_0004s11930g 1 479 + 479 Gaps:15 100.00 470 84.04 0.0 POPTRDRAFT_858519 serine carboxypeptidase S10 family protein
blastp_kegg lcl|pvu:PHAVU_008G033300g 3 479 + 477 Gaps:14 100.00 465 83.44 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa017321mg 1 479 + 479 Gaps:15 99.79 467 83.91 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10011605mg 31 479 + 449 Gaps:15 90.53 486 87.05 0.0 hypothetical protein
blastp_kegg lcl|cit:102631175 31 479 + 449 Gaps:15 90.53 486 87.05 0.0 serine carboxypeptidase-like 25-like
blastp_kegg lcl|mdm:103421517 1 479 + 479 Gaps:22 99.58 475 81.82 0.0 serine carboxypeptidase-like 25
blastp_pdb 3sc2_A 35 301 + 267 Gaps:23 97.30 259 57.54 2e-92 mol:protein length:259 SERINE CARBOXYPEPTIDASE II (CPDW-II)
blastp_pdb 1bcs_A 35 301 + 267 Gaps:23 95.82 263 57.54 3e-92 mol:protein length:263 SERINE CARBOXYPEPTIDASE II
blastp_pdb 1bcr_A 35 301 + 267 Gaps:23 95.82 263 57.54 3e-92 mol:protein length:263 SERINE CARBOXYPEPTIDASE II
blastp_pdb 1wht_A 35 301 + 267 Gaps:23 98.44 256 57.54 4e-92 mol:protein length:256 SERINE CARBOXYPEPTIDASE II
blastp_pdb 1whs_A 35 301 + 267 Gaps:23 98.82 255 57.54 4e-92 mol:protein length:255 SERINE CARBOXYPEPTIDASE II
blastp_pdb 1gxs_C 31 302 + 272 Gaps:20 95.56 270 46.12 4e-68 mol:protein length:270 P-(S)-HYDROXYMANDELONITRILE LYASE CHAIN A
blastp_pdb 1gxs_A 31 302 + 272 Gaps:20 95.56 270 46.12 4e-68 mol:protein length:270 P-(S)-HYDROXYMANDELONITRILE LYASE CHAIN A
blastp_pdb 1bcs_B 329 477 + 149 Gaps:1 93.75 160 62.00 1e-64 mol:protein length:160 SERINE CARBOXYPEPTIDASE II
blastp_pdb 1bcr_B 329 477 + 149 Gaps:1 93.75 160 62.00 1e-64 mol:protein length:160 SERINE CARBOXYPEPTIDASE II
blastp_pdb 1wht_B 329 477 + 149 Gaps:1 98.04 153 62.00 1e-64 mol:protein length:153 SERINE CARBOXYPEPTIDASE II
blastp_uniprot_sprot sp|Q8L9Y0|SCP25_ARATH 1 479 + 479 Gaps:18 100.00 473 75.69 0.0 Serine carboxypeptidase-like 25 OS Arabidopsis thaliana GN SCPL25 PE 2 SV 2
blastp_uniprot_sprot sp|Q9M099|SCP24_ARATH 13 479 + 467 Gaps:16 98.71 465 63.83 0.0 Serine carboxypeptidase 24 OS Arabidopsis thaliana GN SCPL24 PE 1 SV 1
blastp_uniprot_sprot sp|Q1PF08|SCP22_ARATH 24 479 + 456 Gaps:25 96.34 464 63.09 0.0 Serine carboxypeptidase-like 22 OS Arabidopsis thaliana GN SCPL22 PE 2 SV 1
blastp_uniprot_sprot sp|O82229|SCP23_ARATH 32 479 + 448 Gaps:23 94.49 454 63.17 0.0 Putative serine carboxypeptidase-like 23 OS Arabidopsis thaliana GN SCPL23 PE 2 SV 2
blastp_uniprot_sprot sp|Q9ZQQ0|SCP26_ARATH 23 477 + 455 Gaps:33 95.58 452 59.03 2e-175 Serine carboxypeptidase-like 26 OS Arabidopsis thaliana GN SCPL26 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SFB5|SCP27_ARATH 22 477 + 456 Gaps:28 95.86 459 57.50 1e-173 Serine carboxypeptidase-like 27 OS Arabidopsis thaliana GN SCPL27 PE 2 SV 1
blastp_uniprot_sprot sp|P08819|CBP2_WHEAT 35 477 + 443 Gaps:25 96.85 444 56.05 1e-165 Serine carboxypeptidase 2 OS Triticum aestivum GN CBP2 PE 1 SV 2
blastp_uniprot_sprot sp|Q949Q7|SCP29_ARATH 3 476 + 474 Gaps:23 96.24 479 52.71 5e-164 Serine carboxypeptidase-like 29 OS Arabidopsis thaliana GN SCPL29 PE 2 SV 1
blastp_uniprot_sprot sp|P08818|CBP2_HORVU 36 477 + 442 Gaps:27 89.71 476 55.97 5e-162 Serine carboxypeptidase 2 OS Hordeum vulgare GN CBP2 PE 1 SV 2
blastp_uniprot_sprot sp|P55748|CBP22_HORVU 38 477 + 440 Gaps:21 97.94 436 54.10 5e-159 Serine carboxypeptidase II-2 (Fragment) OS Hordeum vulgare GN CXP 2-2 PE 1 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 443 460 18 PS00560 none Serine carboxypeptidases, histidine active site. IPR018202
ProSitePatterns 186 193 8 PS00131 none Serine carboxypeptidases, serine active site. IPR018202
Phobius 1 24 24 SIGNAL_PEPTIDE none Signal peptide region none
Gene3D 34 475 442 G3DSA:3.40.50.1820 none none IPR029058
PRINTS 118 130 13 PR00724 none Carboxypeptidase C serine protease (S10) family signature IPR001563
PRINTS 443 456 14 PR00724 none Carboxypeptidase C serine protease (S10) family signature IPR001563
PRINTS 131 141 11 PR00724 none Carboxypeptidase C serine protease (S10) family signature IPR001563
PRINTS 172 197 26 PR00724 none Carboxypeptidase C serine protease (S10) family signature IPR001563
Pfam 42 473 432 PF00450 none Serine carboxypeptidase IPR001563
Phobius 20 24 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 7 7 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 1 479 479 PTHR11802:SF17 none none none
SUPERFAMILY 34 477 444 SSF53474 none none IPR029058
Phobius 25 479 455 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 1 479 479 PTHR11802 none none IPR001563
Phobius 8 19 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none

3 Localization

Analysis Start End Length
TMHMM 7 29 22
SignalP_GRAM_POSITIVE 1 29 28
SignalP_EUK 1 24 23

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 24   Secretory pathway 1 0.990 0.016 NON-PLANT 24