Protein : Qrob_P0054440.2 Q. robur
Protein Identifier  ? Qrob_P0054440.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=10) PTHR11772:SF8 - gb def: similar to asparagine synthetase [mesorhizobium loti] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 81  
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0 Synonyms

0 GO Terms

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0008s15820g 12 80 + 69 none 27.49 251 73.91 1e-29 POPTRDRAFT_820788 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0910970 12 80 + 69 Gaps:1 27.31 249 76.47 2e-29 Stem-specific protein TSJT1 putative
blastp_kegg lcl|cmo:103483669 12 80 + 69 none 27.60 250 72.46 2e-29 stem-specific protein TSJT1
blastp_kegg lcl|csv:101222053 12 80 + 69 none 27.60 250 72.46 2e-29 stem-specific protein TSJT1-like
blastp_kegg lcl|tcc:TCM_020711 12 80 + 69 none 27.49 251 72.46 2e-28 Aluminum induced protein with YGL and LRDR motifs isoform 1
blastp_kegg lcl|cam:101499374 15 80 + 66 none 26.29 251 72.73 6e-28 stem-specific protein TSJT1-like
blastp_kegg lcl|pop:POPTR_0010s09180g 12 80 + 69 none 27.49 251 69.57 2e-27 POPTRDRAFT_658469 hypothetical protein
blastp_kegg lcl|sot:102595083 12 80 + 69 none 27.49 251 69.57 6e-27 stem-specific protein TSJT1-like
blastp_kegg lcl|pxb:103935880 12 80 + 69 none 27.60 250 68.12 1e-26 stem-specific protein TSJT1-like
blastp_kegg lcl|mdm:103453241 12 80 + 69 none 27.60 250 68.12 1e-26 stem-specific protein TSJT1-like
rpsblast_cdd gnl|CDD|204937 15 56 + 42 none 18.42 228 64.29 6e-18 pfam12481 DUF3700 Aluminium induced protein. This domain family is found in eukaryotes and is approximately 120 amino acids in length. There are two conserved sequence motifs: YGL and LRDR. This family is related to GATase enzyme domains.
rpsblast_cdd gnl|CDD|48483 15 56 + 42 none 18.75 224 64.29 9e-16 cd01910 Wali7 This domain is present in Wali7 a protein of unknown function expressed in wheat and induced by aluminum. Wali7 has a single domain similar to the glutamine amidotransferase domain of glucosamine-fructose 6-phosphate synthase (GLMS or GFAT) glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase) asparagine synthetase B (AsnB) beta lactam synthetase (beta-LS) and glutamate synthase (GltS). The Wali7 domain is also somewhat similar to the Ntn hydrolase fold of the proteasomal alph and beta subunits..

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 14 56 43 PF12481 none Aluminium induced protein IPR024286
Phobius 16 21 6 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 22 80 59 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 15 80 66 PTHR11772:SF8 none none none
Phobius 7 15 9 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 6 6 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 1 21 21 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 15 80 66 PTHR11772 none none none

2 Localization

Analysis Start End Length
TMHMM 7 29 22
SignalP_EUK 1 18 17

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

0 Targeting