Protein : Qrob_P0053970.2 Q. robur
Protein Identifier  ? Qrob_P0053970.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) 1.3.1.80 - Red chlorophyll catabolite reductase. Code Enzyme  EC:1.3.1.80
Gene Prediction Quality  validated Protein length 

Sequence

Length: 280  
Kegg Orthology  K13545
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0010024 phytochromobilin biosynthetic process The chemical reactions and pathways resulting in the formation of phytochromobilin, which involves the oxidative cleavage of heme by a heme oxygenase(HO) to form biliverdin IX alpha.
GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.
GO:0050897 cobalt ion binding Interacting selectively and non-covalently with a cobalt (Co) ion.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102623285 3 279 + 277 Gaps:1 86.52 319 68.48 1e-132 red chlorophyll catabolite reductase chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10026248mg 3 279 + 277 Gaps:1 99.64 277 67.75 3e-132 hypothetical protein
blastp_kegg lcl|csv:101223133 10 279 + 270 Gaps:3 83.54 322 66.91 1e-128 red chlorophyll catabolite reductase chloroplastic-like
blastp_kegg lcl|cmo:103497432 10 279 + 270 Gaps:2 82.72 324 67.16 1e-128 red chlorophyll catabolite reductase-like
blastp_kegg lcl|pop:POPTR_0007s11040g 2 279 + 278 Gaps:6 87.31 323 64.89 3e-127 POPTRDRAFT_819935 hypothetical protein
blastp_kegg lcl|pmum:103339882 10 279 + 270 Gaps:3 96.76 278 58.36 9e-109 red chlorophyll catabolite reductase chloroplastic
blastp_kegg lcl|pper:PRUPE_ppa009783mg 11 279 + 269 Gaps:3 96.40 278 58.58 2e-108 hypothetical protein
blastp_kegg lcl|gmx:100780934 1 279 + 279 Gaps:3 83.89 329 57.61 3e-106 red chlorophyll catabolite reductase chloroplastic-like
blastp_kegg lcl|gmx:100777640 10 279 + 270 Gaps:2 83.23 322 57.46 3e-106 red chlorophyll catabolite reductase chloroplastic-like
blastp_kegg lcl|pop:POPTR_0007s11060g 11 279 + 269 Gaps:2 96.74 276 55.43 1e-105 POPTRDRAFT_764544 hypothetical protein
blastp_pdb 3agc_B 11 279 + 269 Gaps:7 97.10 276 48.88 9e-81 mol:protein length:276 Red chlorophyll catabolite reductase chlorop
blastp_pdb 3agc_A 11 279 + 269 Gaps:7 97.10 276 48.88 9e-81 mol:protein length:276 Red chlorophyll catabolite reductase chlorop
blastp_pdb 3agb_B 11 279 + 269 Gaps:7 97.10 276 48.88 9e-81 mol:protein length:276 Red chlorophyll catabolite reductase chlorop
blastp_pdb 3agb_A 11 279 + 269 Gaps:7 97.10 276 48.88 9e-81 mol:protein length:276 Red chlorophyll catabolite reductase chlorop
blastp_pdb 3aga_B 11 279 + 269 Gaps:7 97.10 276 48.51 5e-80 mol:protein length:276 Red chlorophyll catabolite reductase chlorop
blastp_pdb 3aga_A 11 279 + 269 Gaps:7 97.10 276 48.51 5e-80 mol:protein length:276 Red chlorophyll catabolite reductase chlorop
blastp_pdb 2zxl_B 11 279 + 269 Gaps:7 94.04 285 48.51 8e-80 mol:protein length:285 Red chlorophyll catabolite reductase chlorop
blastp_pdb 2zxl_A 11 279 + 269 Gaps:7 94.04 285 48.51 8e-80 mol:protein length:285 Red chlorophyll catabolite reductase chlorop
blastp_pdb 2zxk_B 11 279 + 269 Gaps:7 94.04 285 48.51 8e-80 mol:protein length:285 Red chlorophyll catabolite reductase chlorop
blastp_pdb 2zxk_A 11 279 + 269 Gaps:7 94.04 285 48.51 8e-80 mol:protein length:285 Red chlorophyll catabolite reductase chlorop
blastp_uniprot_sprot sp|Q8LDU4|RCCR_ARATH 11 279 + 269 Gaps:7 84.01 319 48.51 5e-79 Red chlorophyll catabolite reductase chloroplastic OS Arabidopsis thaliana GN RCCR PE 1 SV 2
blastp_uniprot_sprot sp|Q9MTQ6|RCCR_HORVU 76 279 + 204 Gaps:2 98.54 205 42.08 5e-56 Red chlorophyll catabolite reductase (Fragment) OS Hordeum vulgare GN rccR PE 2 SV 1
rpsblast_cdd gnl|CDD|178193 11 279 + 269 Gaps:2 100.00 267 59.18 1e-112 PLN02581 PLN02581 red chlorophyll catabolite reductase.
rpsblast_cdd gnl|CDD|203437 21 277 + 257 Gaps:2 100.00 255 58.04 1e-106 pfam06405 RCC_reductase Red chlorophyll catabolite reductase (RCC reductase). This family consists of several red chlorophyll catabolite reductase (RCC reductase) proteins. Red chlorophyll catabolite (RCC) reductase (RCCR) and pheophorbide (Pheide) a oxygenase (PaO) catalyze the key reaction of chlorophyll catabolism porphyrin macrocycle cleavage of Pheide a to a primary fluorescent catabolite (pFCC).

2 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 34 177 144 PF05996 none Ferredoxin-dependent bilin reductase IPR009249
Pfam 21 277 257 PF06405 "KEGG:00860+1.3.1.80","MetaCyc:PWY-5098","MetaCyc:PWY-6927","UniPathway:UPA00674" Red chlorophyll catabolite reductase (RCC reductase) IPR009439

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5

0 Targeting