Protein : Qrob_P0053940.2 Q. robur
Protein Identifier  ? Qrob_P0053940.2 Organism . Name  Quercus robur
Score  89.0 Score Type  egn
Protein Description  (M=1) PTHR23050//PTHR23050:SF123 - CALCIUM BINDING PROTEIN // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 199  
Kegg Orthology  K13448
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005509 calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1407570 31 198 + 168 Gaps:1 99.41 170 86.39 4e-98 Caltractin putative (EC:1.3.1.74)
blastp_kegg lcl|tcc:TCM_000608 31 198 + 168 none 99.41 169 84.52 2e-97 ARM repeat protein interacting with ABF2 isoform 2
blastp_kegg lcl|pmum:103339880 31 198 + 168 none 99.41 169 83.93 2e-96 caltractin
blastp_kegg lcl|pxb:103964491 31 198 + 168 none 99.41 169 83.33 1e-95 probable calcium-binding protein CML20
blastp_kegg lcl|fve:101295453 31 198 + 168 Gaps:1 99.41 170 82.84 2e-95 caltractin-like
blastp_kegg lcl|cic:CICLE_v10026635mg 31 198 + 168 none 99.41 169 81.55 1e-94 hypothetical protein
blastp_kegg lcl|cit:102623879 31 198 + 168 none 99.41 169 81.55 1e-94 caltractin-like
blastp_kegg lcl|pper:PRUPE_ppa012454mg 31 198 + 168 none 99.41 169 81.55 2e-94 hypothetical protein
blastp_kegg lcl|mdm:103425106 31 198 + 168 none 99.41 169 82.14 3e-94 probable calcium-binding protein CML20
blastp_kegg lcl|mdm:103403014 31 198 + 168 none 99.41 169 81.55 8e-94 probable calcium-binding protein CML20
blastp_pdb 3kf9_C 49 196 + 148 none 99.33 149 66.89 7e-67 mol:protein length:149 Caltractin
blastp_pdb 3kf9_A 49 196 + 148 none 99.33 149 66.89 7e-67 mol:protein length:149 Caltractin
blastp_pdb 3qrx_A 37 196 + 160 Gaps:1 94.08 169 58.49 3e-64 mol:protein length:169 Centrin
blastp_pdb 2ggm_B 50 195 + 146 none 84.88 172 56.85 2e-56 mol:protein length:172 Centrin-2
blastp_pdb 2ggm_A 50 195 + 146 none 84.88 172 56.85 2e-56 mol:protein length:172 Centrin-2
blastp_pdb 2obh_B 51 193 + 143 none 100.00 143 56.64 2e-54 mol:protein length:143 Centrin-2
blastp_pdb 2obh_A 51 193 + 143 none 100.00 143 56.64 2e-54 mol:protein length:143 Centrin-2
blastp_pdb 1osa_A 17 191 + 175 Gaps:16 97.97 148 62.76 9e-41 mol:protein length:148 CALMODULIN
blastp_pdb 1n0y_B 17 191 + 175 Gaps:16 97.97 148 62.76 9e-41 mol:protein length:148 Calmodulin
blastp_pdb 1n0y_A 17 191 + 175 Gaps:16 97.97 148 62.76 9e-41 mol:protein length:148 Calmodulin
blastp_uniprot_sprot sp|P41210|CATR_ATRNU 39 198 + 160 none 95.81 167 86.88 3e-95 Caltractin OS Atriplex nummularia PE 2 SV 1
blastp_uniprot_sprot sp|O82659|CML20_ARATH 31 197 + 167 Gaps:1 98.22 169 81.93 2e-90 Probable calcium-binding protein CML20 OS Arabidopsis thaliana GN CML20 PE 1 SV 1
blastp_uniprot_sprot sp|Q7F0J0|CML13_ORYSJ 35 198 + 164 Gaps:1 97.63 169 74.55 5e-82 Probable calcium-binding protein CML13 OS Oryza sativa subsp. japonica GN CML13 PE 2 SV 1
blastp_uniprot_sprot sp|O23184|CML19_ARATH 42 197 + 156 none 93.41 167 71.15 5e-75 Calcium-binding protein CML19 OS Arabidopsis thaliana GN CML19 PE 2 SV 1
blastp_uniprot_sprot sp|Q06827|CATR_SCHDU 34 195 + 162 Gaps:2 97.62 168 64.63 9e-71 Caltractin OS Scherffelia dubia PE 1 SV 1
blastp_uniprot_sprot sp|Q338P8|CML8_ORYSJ 46 197 + 152 none 79.58 191 71.71 8e-69 Probable calcium-binding protein CML8 OS Oryza sativa subsp. japonica GN CML8 PE 2 SV 1
blastp_uniprot_sprot sp|P43646|CATR_TETST 50 196 + 147 none 99.32 148 65.99 8e-65 Caltractin (Fragment) OS Tetraselmis striata PE 2 SV 1
blastp_uniprot_sprot sp|P54213|CATR_DUNSA 37 195 + 159 none 94.08 169 58.49 8e-64 Caltractin OS Dunaliella salina PE 2 SV 1
blastp_uniprot_sprot sp|P05434|CATR_CHLRE 37 196 + 160 Gaps:1 94.08 169 58.49 1e-63 Caltractin OS Chlamydomonas reinhardtii PE 1 SV 1
blastp_uniprot_sprot sp|P43645|CATR_SPESI 50 196 + 147 none 99.32 148 63.27 5e-62 Caltractin (Fragment) OS Spermatozopsis similis PE 2 SV 1

18 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 66 78 13 PS00018 none EF-hand calcium-binding domain. IPR018247
ProSiteProfiles 126 161 36 PS50222 none EF-hand calcium-binding domain profile. IPR002048
ProSitePatterns 102 114 13 PS00018 none EF-hand calcium-binding domain. IPR018247
SUPERFAMILY 48 193 146 SSF47473 none none none
PANTHER 1 195 195 PTHR23050 none none none
PANTHER 1 195 195 PTHR23050:SF123 none none none
Pfam 131 191 61 PF13499 none EF-hand domain pair IPR011992
Pfam 58 118 61 PF13499 none EF-hand domain pair IPR011992
ProSiteProfiles 89 124 36 PS50222 none EF-hand calcium-binding domain profile. IPR002048
ProSiteProfiles 162 197 36 PS50222 none EF-hand calcium-binding domain profile. IPR002048
Gene3D 46 193 148 G3DSA:1.10.238.10 none none IPR011992
SMART 130 158 29 SM00054 none EF-hand, calcium binding motif IPR002048
SMART 57 85 29 SM00054 none EF-hand, calcium binding motif IPR002048
SMART 166 194 29 SM00054 none EF-hand, calcium binding motif IPR002048
SMART 93 121 29 SM00054 none EF-hand, calcium binding motif IPR002048
ProSitePatterns 175 187 13 PS00018 none EF-hand calcium-binding domain. IPR018247
ProSitePatterns 139 151 13 PS00018 none EF-hand calcium-binding domain. IPR018247
ProSiteProfiles 53 88 36 PS50222 none EF-hand calcium-binding domain profile. IPR002048

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 15   Secretory pathway 4 0.682 0.053 NON-PLANT 15