Protein : Qrob_P0050160.2 Q. robur
Protein Identifier  ? Qrob_P0050160.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=78) PTHR23155//PTHR23155:SF461 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED (PTHR23155:SF461) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 251  
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Protein Sequence Displayer

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0 Synonyms

0 GO Terms

14 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mtr:MTR_5g028610 11 243 + 233 Gaps:14 21.72 1082 36.60 6e-28 Nbs-lrr resistance protein
blastp_kegg lcl|pvu:PHAVU_002G135100g 13 244 + 232 Gaps:35 21.34 1101 36.17 1e-27 hypothetical protein
blastp_kegg lcl|mtr:MTR_125s0001 7 244 + 238 Gaps:45 59.71 340 37.93 6e-27 Cc-nbs-lrr resistance protein
blastp_kegg lcl|vvi:100247224 12 244 + 233 Gaps:4 19.41 1211 38.72 2e-26 putative disease resistance protein RGA3-like
blastp_kegg lcl|pvu:PHAVU_002G135600g 13 244 + 232 Gaps:39 20.69 1136 35.74 1e-25 hypothetical protein
blastp_kegg lcl|gmx:102662991 13 244 + 232 Gaps:39 21.54 1091 36.17 1e-25 putative disease resistance protein RGA3-like
blastp_kegg lcl|mtr:MTR_5g028340 13 243 + 231 Gaps:33 22.02 1090 35.42 1e-25 Cc-nbs-lrr resistance protein
blastp_kegg lcl|mdm:103451551 7 244 + 238 Gaps:40 22.58 1125 36.22 2e-25 disease resistance protein RGA2-like
blastp_kegg lcl|tcc:TCM_031060 2 245 + 244 Gaps:25 21.47 1234 35.09 3e-25 Leucine-rich repeat containing protein putative
blastp_kegg lcl|mtr:MTR_7g013560 3 244 + 242 Gaps:50 21.42 971 38.94 9e-25 Nbs-lrr resistance protein
blastp_uniprot_sprot sp|Q7XA39|RGA4_SOLBU 2 245 + 244 Gaps:42 21.86 988 32.87 3e-16 Putative disease resistance protein RGA4 OS Solanum bulbocastanum GN RGA4 PE 2 SV 1
blastp_uniprot_sprot sp|Q7XA40|RGA3_SOLBU 15 244 + 230 Gaps:48 20.36 992 32.67 8e-14 Putative disease resistance protein RGA3 OS Solanum bulbocastanum GN RGA3 PE 2 SV 2
blastp_uniprot_sprot sp|Q7XBQ9|RGA2_SOLBU 82 244 + 163 Gaps:6 17.42 970 31.36 1e-13 Disease resistance protein RGA2 OS Solanum bulbocastanum GN RGA2 PE 1 SV 1
blastp_uniprot_sprot sp|Q7XA42|RGA1_SOLBU 137 244 + 108 Gaps:4 11.44 979 39.29 4e-11 Putative disease resistance protein RGA1 OS Solanum bulbocastanum GN RGA1 PE 2 SV 2

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 131 220 90 PTHR23155:SF461 none none none
PANTHER 14 60 47 PTHR23155 none none none
Gene3D 110 233 124 G3DSA:3.80.10.10 none none none
PANTHER 14 60 47 PTHR23155:SF461 none none none
PANTHER 131 220 90 PTHR23155 none none none
SUPERFAMILY 9 223 215 SSF52047 none none none

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting