Protein : Qrob_P0050070.2 Q. robur
Protein Identifier  ? Qrob_P0050070.2 Organism . Name  Quercus robur
Score  5.2 Score Type  egn
Protein Description  (M=1) KOG0498//KOG0499//KOG0500//KOG0501//KOG0614//KOG1113 - K+-channel ERG and related proteins contain PAS/PAC sensor domain [Inorganic ion transport and metabolism Signal transduction mechanisms]. // Cyclic nucleotide-gated cation channel CNCG4 [Inorganic ion transport and metabolism Signal transduction mechanisms]. // Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins [Inorganic ion transport and metabolism Signal transduction mechanisms]. // K+-channel KCNQ [Inorganic ion transport and metabolism]. // cGMP-dependent protein kinase [Signal transduction mechanisms]. // cAMP-dependent protein kinase types I and II regulatory subunit [Signal transduction mechanisms]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 511  
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0006813 potassium ion transport The directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0005216 ion channel activity Enables the facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. May be either selective (it enables passage of a specific ion only) or non-selective (it enables passage of two or more ions of same charge but different size).
GO:0006811 ion transport The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0005249 voltage-gated potassium channel activity Enables the transmembrane transfer of a potassium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa002150mg 3 505 + 503 none 71.05 708 79.32 0.0 hypothetical protein
blastp_kegg lcl|pmum:103338807 3 505 + 503 none 65.75 765 79.52 0.0 potassium channel SKOR-like
blastp_kegg lcl|tcc:TCM_013007 1 504 + 504 none 61.39 821 77.18 0.0 STELAR K+ outward rectifier isoform 1
blastp_kegg lcl|pop:POPTR_0012s04000g 2 504 + 503 none 61.34 820 77.34 0.0 POPTRDRAFT_569364 Potassium channel SKOR family protein
blastp_kegg lcl|mdm:103431252 3 504 + 502 none 65.79 763 79.08 0.0 potassium channel SKOR-like
blastp_kegg lcl|fve:101314573 3 504 + 502 none 65.19 770 76.69 0.0 potassium channel SKOR-like
blastp_kegg lcl|rcu:RCOM_0287640 2 504 + 503 Gaps:1 61.67 814 77.29 0.0 Potassium channel SKOR putative (EC:3.1.1.5)
blastp_kegg lcl|pxb:103950549 3 504 + 502 none 65.79 763 77.89 0.0 potassium channel SKOR-like
blastp_kegg lcl|sot:102605039 1 504 + 504 none 60.36 835 74.21 0.0 potassium channel SKOR-like
blastp_kegg lcl|sly:101248180 1 504 + 504 none 60.29 836 73.61 0.0 potassium channel SKOR-like
blastp_pdb 3bpz_D 249 425 + 177 Gaps:7 85.15 202 23.26 1e-07 mol:protein length:202 Potassium/sodium hyperpolarization-activated
blastp_pdb 3bpz_C 249 425 + 177 Gaps:7 85.15 202 23.26 1e-07 mol:protein length:202 Potassium/sodium hyperpolarization-activated
blastp_pdb 3bpz_B 249 425 + 177 Gaps:7 85.15 202 23.26 1e-07 mol:protein length:202 Potassium/sodium hyperpolarization-activated
blastp_pdb 3bpz_A 249 425 + 177 Gaps:7 85.15 202 23.26 1e-07 mol:protein length:202 Potassium/sodium hyperpolarization-activated
blastp_pdb 3etq_B 244 425 + 182 Gaps:9 87.75 204 22.91 2e-07 mol:protein length:204 Potassium/sodium hyperpolarization-activated
blastp_pdb 3etq_A 244 425 + 182 Gaps:9 87.75 204 22.91 2e-07 mol:protein length:204 Potassium/sodium hyperpolarization-activated
blastp_pdb 1q5o_A 249 425 + 177 Gaps:7 83.09 207 22.67 3e-07 mol:protein length:207 Potassium/sodium hyperpolarization-activated
blastp_pdb 1q43_B 249 425 + 177 Gaps:7 83.09 207 22.67 3e-07 mol:protein length:207 Potassium/sodium hyperpolarization-activated
blastp_pdb 1q43_A 249 425 + 177 Gaps:7 83.09 207 22.67 3e-07 mol:protein length:207 Potassium/sodium hyperpolarization-activated
blastp_pdb 1q3e_B 249 425 + 177 Gaps:7 83.09 207 22.67 3e-07 mol:protein length:207 Potassium/sodium hyperpolarization-activated
blastp_uniprot_sprot sp|Q9M8S6|SKOR_ARATH 3 504 + 502 Gaps:1 60.51 828 68.86 0.0 Potassium channel SKOR OS Arabidopsis thaliana GN SKOR PE 1 SV 1
blastp_uniprot_sprot sp|Q653P0|KOR1_ORYSJ 2 504 + 503 Gaps:1 58.51 858 68.53 0.0 Potassium channel KOR1 OS Oryza sativa subsp. japonica GN Os06g0250600 PE 2 SV 1
blastp_uniprot_sprot sp|Q94A76|GORK_ARATH 3 504 + 502 Gaps:1 61.10 820 64.47 0.0 Potassium channel GORK OS Arabidopsis thaliana GN GORK PE 1 SV 2
blastp_uniprot_sprot sp|Q7XUW4|KOR2_ORYSJ 2 504 + 503 Gaps:3 69.82 719 57.37 0.0 Potassium channel KOR2 OS Oryza sativa subsp. japonica GN Os04g0445000 PE 2 SV 2
blastp_uniprot_sprot sp|Q38998|AKT1_ARATH 2 504 + 503 Gaps:24 57.99 857 36.02 5e-89 Potassium channel AKT1 OS Arabidopsis thaliana GN AKT1 PE 1 SV 2
blastp_uniprot_sprot sp|Q6K3T2|KAT1_ORYSJ 3 441 + 439 Gaps:15 60.45 718 36.87 5e-86 Potassium channel KAT1 OS Oryza sativa subsp. japonica GN Os02g0245800 PE 2 SV 1
blastp_uniprot_sprot sp|Q5JM04|KAT3_ORYSJ 2 439 + 438 Gaps:15 86.25 502 37.41 1e-84 Potassium channel KAT3 OS Oryza sativa subsp. japonica GN Os01g0756700 PE 2 SV 1
blastp_uniprot_sprot sp|Q39128|KAT1_ARATH 3 445 + 443 Gaps:18 65.14 677 35.37 2e-81 Potassium channel KAT1 OS Arabidopsis thaliana GN KAT1 PE 1 SV 2
blastp_uniprot_sprot sp|P0C550|AKT1_ORYSI 2 504 + 503 Gaps:22 53.58 935 34.13 4e-81 Potassium channel AKT1 OS Oryza sativa subsp. indica GN AKT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q0JKV1|AKT1_ORYSJ 2 504 + 503 Gaps:22 53.58 935 34.13 4e-81 Potassium channel AKT1 OS Oryza sativa subsp. japonica GN AKT1 PE 2 SV 1

28 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 247 510 264 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 2 246 245 SSF81324 none none none
Phobius 54 192 139 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 216 220 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 470 506 37 SSF48403 none none IPR020683
SUPERFAMILY 249 439 191 SSF51206 none none IPR018490
Gene3D 249 304 56 G3DSA:1.10.287.630 none none none
PANTHER 2 509 508 PTHR10217 none none none
Phobius 32 53 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 6 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 305 430 126 G3DSA:2.60.120.10 none none IPR014710
Pfam 35 241 207 PF00520 none Ion transport protein IPR005821
Phobius 193 215 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 458 506 49 G3DSA:1.25.40.20 none none IPR020683
Pfam 340 425 86 PF00027 none Cyclic nucleotide-binding domain IPR000595
Phobius 221 246 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PRINTS 13 20 8 PR01463 none EAG/ELK/ERG potassium channel family signature IPR003938
PRINTS 193 210 18 PR01463 none EAG/ELK/ERG potassium channel family signature IPR003938
PRINTS 36 46 11 PR01463 none EAG/ELK/ERG potassium channel family signature IPR003938
PRINTS 237 246 10 PR01463 none EAG/ELK/ERG potassium channel family signature IPR003938
PRINTS 145 155 11 PR01463 none EAG/ELK/ERG potassium channel family signature IPR003938
PANTHER 2 509 508 PTHR10217:SF478 none none none
Phobius 7 26 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SMART 321 440 120 SM00100 none Cyclic nucleotide-monophosphate binding domain IPR000595
ProSiteProfiles 321 442 122 PS50042 none cAMP/cGMP binding motif profile. IPR000595
Phobius 27 31 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 2 245 244 G3DSA:1.10.287.70 none none none
ProSiteProfiles 471 510 40 PS50297 none Ankyrin repeat region circular profile. IPR020683

5 Localization

Analysis Start End Length
TMHMM 222 244 22
TMHMM 136 158 22
TMHMM 32 54 22
TMHMM 5 27 22
TMHMM 193 215 22

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 22   Secretory pathway 1 0.982 0.040 NON-PLANT 22