Protein : Qrob_P0048920.2 Q. robur
Protein Identifier  ? Qrob_P0048920.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PF00560//PF00931//PF01582//PF07725//PF13504 - Leucine Rich Repeat // NB-ARC domain // TIR domain // Leucine Rich Repeat // Leucine rich repeat Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1095  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0043531 ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103413472 2 1005 + 1004 Gaps:148 85.06 1272 45.56 0.0 TMV resistance protein N-like
blastp_kegg lcl|pxb:103935009 2 1005 + 1004 Gaps:149 87.41 1239 44.97 0.0 TMV resistance protein N-like
blastp_kegg lcl|cic:CICLE_v10023938mg 2 1055 + 1054 Gaps:175 90.35 1254 43.42 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa022091mg 2 1019 + 1018 Gaps:182 91.58 1105 46.34 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10024735mg 2 1055 + 1054 Gaps:180 94.87 1189 40.87 0.0 hypothetical protein
blastp_kegg lcl|pxb:103939877 2 806 + 805 Gaps:118 68.65 1292 46.67 0.0 TMV resistance protein N-like
blastp_kegg lcl|pxb:103939875 2 806 + 805 Gaps:118 53.34 1663 46.67 0.0 TMV resistance protein N-like
blastp_kegg lcl|pxb:103956565 2 806 + 805 Gaps:118 53.31 1664 47.13 0.0 TMV resistance protein N-like
blastp_kegg lcl|vvi:100256761 2 1073 + 1072 Gaps:197 93.20 1250 41.72 0.0 TMV resistance protein N-like
blastp_kegg lcl|cit:102620345 2 1006 + 1005 Gaps:148 94.84 1144 41.47 0.0 TMV resistance protein N-like
blastp_pdb 3ozi_B 2 77 + 76 Gaps:1 37.75 204 49.35 9e-16 mol:protein length:204 L6tr
blastp_pdb 3ozi_A 2 77 + 76 Gaps:1 37.75 204 49.35 9e-16 mol:protein length:204 L6tr
blastp_pdb 3jrn_A 2 75 + 74 none 42.05 176 45.95 3e-14 mol:protein length:176 AT1G72930 protein
blastp_uniprot_sprot sp|Q40392|TMVRN_NICGU 3 890 + 888 Gaps:150 83.57 1144 35.77 1e-141 TMV resistance protein N OS Nicotiana glutinosa GN N PE 1 SV 1
blastp_uniprot_sprot sp|O82500|Y4117_ARATH 3 893 + 891 Gaps:173 77.90 1095 35.99 4e-102 Putative disease resistance protein At4g11170 OS Arabidopsis thaliana GN At4g11170 PE 2 SV 1
blastp_uniprot_sprot sp|O23530|SNC1_ARATH 2 818 + 817 Gaps:263 74.10 1301 38.69 7e-91 Protein SUPPRESSOR OF npr1-1 CONSTITUTIVE 1 OS Arabidopsis thaliana GN SNC1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9SZ67|WRK19_ARATH 5 742 + 738 Gaps:121 39.21 1895 32.44 5e-78 Probable WRKY transcription factor 19 OS Arabidopsis thaliana GN WRKY19 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL92|WRK16_ARATH 8 830 + 823 Gaps:168 57.22 1372 32.23 1e-69 Probable WRKY transcription factor 16 OS Arabidopsis thaliana GN WRKY16 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FH83|WRK52_ARATH 8 830 + 823 Gaps:179 71.97 1288 32.36 2e-66 Probable WRKY transcription factor 52 OS Arabidopsis thaliana GN WRKY52 PE 2 SV 3
blastp_uniprot_sprot sp|Q9FKN7|DAR4_ARATH 11 839 + 829 Gaps:158 49.66 1613 30.96 2e-60 Protein DA1-related 4 OS Arabidopsis thaliana GN DAR4 PE 1 SV 2
blastp_uniprot_sprot sp|P0CB16|DRL25_ARATH 458 805 + 348 Gaps:118 27.56 1201 46.83 1e-14 Putative disease resistance protein At4g19050 OS Arabidopsis thaliana GN At4g19050 PE 3 SV 2
blastp_uniprot_sprot sp|Q9SSN3|TIR_ARATH 2 75 + 74 none 42.05 176 45.95 1e-13 Toll/interleukin-1 receptor-like protein OS Arabidopsis thaliana GN TIR PE 1 SV 1
blastp_uniprot_sprot sp|Q9FHE9|P2A08_ARATH 4 79 + 76 none 21.47 354 44.74 3e-12 Protein PHLOEM PROTEIN 2-LIKE A8 OS Arabidopsis thaliana GN PP2A8 PE 2 SV 1
rpsblast_cdd gnl|CDD|178749 2 876 + 875 Gaps:161 79.97 1153 34.38 1e-110 PLN03210 PLN03210 Resistant to P. syringae 6 Provisional.
rpsblast_cdd gnl|CDD|201512 125 332 + 208 Gaps:53 88.77 285 29.64 2e-23 pfam00931 NB-ARC NB-ARC domain.
rpsblast_cdd gnl|CDD|201870 4 78 + 75 Gaps:2 57.04 135 57.14 6e-20 pfam01582 TIR TIR domain. The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88 interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn these associate with various kinases to set off signalling cascades.
rpsblast_cdd gnl|CDD|197607 4 75 + 72 Gaps:1 52.14 140 47.95 7e-19 smart00255 TIR Toll - interleukin 1 - resistance.
rpsblast_cdd gnl|CDD|34495 512 798 + 287 Gaps:17 74.11 394 23.97 7e-08 COG4886 COG4886 Leucine-rich repeat (LRR) protein [Function unknown].
rpsblast_kog gnl|CDD|39857 98 799 + 702 Gaps:170 78.74 889 26.29 4e-31 KOG4658 KOG4658 KOG4658 Apoptotic ATPase [Signal transduction mechanisms].
rpsblast_kog gnl|CDD|35838 505 799 + 295 Gaps:81 42.83 1081 34.13 2e-10 KOG0618 KOG0618 KOG0618 Serine/threonine phosphatase 2C containing leucine-rich repeats similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms].

26 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 2 627 626 PTHR11017 none none none
PANTHER 743 817 75 PTHR11017 none none none
SUPERFAMILY 106 324 219 SSF52540 none none IPR027417
Pfam 251 332 82 PF00931 none NB-ARC domain IPR002182
Pfam 118 229 112 PF00931 none NB-ARC domain IPR002182
ProSiteProfiles 607 627 21 PS51450 none Leucine-rich repeat profile. IPR001611
ProSiteProfiles 738 759 22 PS51450 none Leucine-rich repeat profile. IPR001611
PANTHER 743 817 75 PTHR11017:SF146 none none none
Pfam 760 777 18 PF13504 none Leucine rich repeat IPR001611
Gene3D 432 792 361 G3DSA:3.80.10.10 none none none
ProSiteProfiles 715 736 22 PS51450 none Leucine-rich repeat profile. IPR001611
ProSiteProfiles 761 783 23 PS51450 none Leucine-rich repeat profile. IPR001611
Pfam 494 512 19 PF07725 none Leucine Rich Repeat IPR011713
Gene3D 132 226 95 G3DSA:3.40.50.300 none none IPR027417
Gene3D 3 73 71 G3DSA:3.40.50.10140 none none IPR000157
PANTHER 2 627 626 PTHR11017:SF146 none none none
Pfam 3 79 77 PF01582 none TIR domain IPR000157
ProSiteProfiles 1 69 69 PS50104 none TIR domain profile. IPR000157
SUPERFAMILY 2 76 75 SSF52200 none none IPR000157
SUPERFAMILY 370 385 16 SSF52058 none none none
SUPERFAMILY 435 827 393 SSF52058 none none none
SMART 1 83 83 SM00255 none Toll - interleukin 1 - resistance IPR000157
PRINTS 265 279 15 PR00364 none Disease resistance protein signature none
PRINTS 134 149 16 PR00364 none Disease resistance protein signature none
PRINTS 624 640 17 PR00364 none Disease resistance protein signature none
Pfam 715 734 20 PF00560 none Leucine Rich Repeat IPR001611

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2

0 Targeting