Protein : Qrob_P0048410.2 Q. robur
Protein Identifier  ? Qrob_P0048410.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K14298 - mRNA export factor Gene Prediction Quality  validated
Protein length 

Sequence

Length: 175  
Kegg Orthology  K14298
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

32 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100250245 3 174 + 172 Gaps:8 46.86 350 92.07 8e-107 rae1-like protein At1g80670
blastp_kegg lcl|vvi:100250787 3 174 + 172 Gaps:9 47.25 345 92.64 8e-105 rae1-like protein At1g80670
blastp_kegg lcl|gmx:100527204 3 174 + 172 Gaps:8 47.26 347 89.63 2e-104 uncharacterized LOC100527204
blastp_kegg lcl|tcc:TCM_027395 3 174 + 172 Gaps:8 47.13 348 89.02 3e-104 Transducin/WD40 repeat-like superfamily protein isoform 1
blastp_kegg lcl|cam:101506774 3 174 + 172 Gaps:8 42.71 384 90.24 3e-104 rae1-like protein At1g80670-like
blastp_kegg lcl|mtr:MTR_2g008410 3 174 + 172 Gaps:8 46.72 351 89.02 4e-104 RNA export
blastp_kegg lcl|gmx:100803005 3 174 + 172 Gaps:8 47.26 347 89.63 5e-104 rae1-like protein At1g80670-like
blastp_kegg lcl|cic:CICLE_v10025978mg 3 174 + 172 Gaps:8 46.86 350 89.02 7e-104 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_006G208000g 3 174 + 172 Gaps:8 47.26 347 89.02 8e-104 hypothetical protein
blastp_kegg lcl|cit:102621900 3 174 + 172 Gaps:8 46.86 350 88.41 4e-103 rae1-like protein At1g80670-like
blastp_pdb 3mmy_G 4 167 + 164 Gaps:24 44.57 368 53.05 7e-45 mol:protein length:368 mRNA export factor
blastp_pdb 3mmy_E 4 167 + 164 Gaps:24 44.57 368 53.05 7e-45 mol:protein length:368 mRNA export factor
blastp_pdb 3mmy_C 4 167 + 164 Gaps:24 44.57 368 53.05 7e-45 mol:protein length:368 mRNA export factor
blastp_pdb 3mmy_A 4 167 + 164 Gaps:24 44.57 368 53.05 7e-45 mol:protein length:368 mRNA export factor
blastp_pdb 2i3s_E 11 124 + 114 Gaps:27 35.82 349 36.00 2e-13 mol:protein length:349 Cell cycle arrest protein
blastp_pdb 2i3s_C 11 124 + 114 Gaps:27 35.82 349 36.00 2e-13 mol:protein length:349 Cell cycle arrest protein
blastp_pdb 2i3s_A 11 124 + 114 Gaps:27 35.82 349 36.00 2e-13 mol:protein length:349 Cell cycle arrest protein
blastp_pdb 1u4c_B 11 124 + 114 Gaps:27 35.82 349 36.00 2e-13 mol:protein length:349 Cell cycle arrest protein BUB3
blastp_pdb 1u4c_A 11 124 + 114 Gaps:27 35.82 349 36.00 2e-13 mol:protein length:349 Cell cycle arrest protein BUB3
blastp_pdb 2i3t_G 11 124 + 114 Gaps:27 36.66 341 36.00 2e-13 mol:protein length:341 Cell cycle arrest protein
blastp_uniprot_sprot sp|Q38942|RAE1L_ARATH 3 174 + 172 Gaps:8 46.99 349 85.98 5e-101 Rae1-like protein At1g80670 OS Arabidopsis thaliana GN At1g80670 PE 2 SV 2
blastp_uniprot_sprot sp|Q5FVA9|RAE1L_XENTR 4 154 + 151 Gaps:21 41.85 368 54.55 6e-45 mRNA export factor OS Xenopus tropicalis GN rae1 PE 2 SV 1
blastp_uniprot_sprot sp|Q7ZWF0|RAE1L_DANRE 4 167 + 164 Gaps:24 44.57 368 53.05 9e-45 mRNA export factor OS Danio rerio GN rae1 PE 2 SV 2
blastp_uniprot_sprot sp|Q8C570|RAE1L_MOUSE 4 167 + 164 Gaps:24 44.57 368 53.66 1e-44 mRNA export factor OS Mus musculus GN Rae1 PE 1 SV 1
blastp_uniprot_sprot sp|Q3SWS8|RAE1L_RAT 4 167 + 164 Gaps:24 44.57 368 53.05 2e-44 mRNA export factor OS Rattus norvegicus GN Rae1 PE 2 SV 1
blastp_uniprot_sprot sp|Q4R6D2|RAE1L_MACFA 4 167 + 164 Gaps:24 44.57 368 53.05 2e-44 mRNA export factor OS Macaca fascicularis GN RAE1 PE 2 SV 1
blastp_uniprot_sprot sp|Q5RF99|RAEL1_PONAB 4 167 + 164 Gaps:24 44.57 368 53.05 3e-44 mRNA export factor OS Pongo abelii GN RAE1 PE 2 SV 1
blastp_uniprot_sprot sp|P78406|RAE1L_HUMAN 4 167 + 164 Gaps:24 44.57 368 53.05 3e-44 mRNA export factor OS Homo sapiens GN RAE1 PE 1 SV 1
blastp_uniprot_sprot sp|A5GFN6|RAEL1_PIG 4 167 + 164 Gaps:24 44.57 368 53.05 3e-44 mRNA export factor OS Sus scrofa GN RAE1 PE 3 SV 1
blastp_uniprot_sprot sp|Q5E9A4|RAE1L_BOVIN 4 167 + 164 Gaps:24 44.57 368 53.05 3e-44 mRNA export factor OS Bos taurus GN RAE1 PE 2 SV 1

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 11 135 125 G3DSA:2.130.10.10 none none IPR015943
PANTHER 3 168 166 PTHR10971:SF11 none none none
PANTHER 3 168 166 PTHR10971 none none none
SUPERFAMILY 13 129 117 SSF50978 none none IPR017986

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2

0 Targeting