Protein : Qrob_P0046490.2 Q. robur
Protein Identifier  ? Qrob_P0046490.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) K11294 - nucleolin Gene Prediction Quality  validated
Protein length 

Sequence

Length: 321  
Kegg Orthology  K11294
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003676 nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa008913mg 1 320 + 320 Gaps:31 95.86 314 78.41 2e-144 hypothetical protein
blastp_kegg lcl|pmum:103329762 1 320 + 320 Gaps:25 95.86 314 76.74 1e-141 28 kDa ribonucleoprotein chloroplastic-like
blastp_kegg lcl|vvi:100266472 1 318 + 318 Gaps:22 96.15 312 74.33 5e-134 31 kDa ribonucleoprotein chloroplastic-like
blastp_kegg lcl|fve:101314300 1 318 + 318 Gaps:39 95.58 294 74.02 6e-126 31 kDa ribonucleoprotein chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa009286mg 1 318 + 318 Gaps:37 95.64 298 69.12 4e-123 hypothetical protein
blastp_kegg lcl|pmum:103337967 1 318 + 318 Gaps:37 95.64 298 69.12 1e-122 28 kDa ribonucleoprotein chloroplastic
blastp_kegg lcl|vvi:100257045 7 318 + 312 Gaps:18 94.19 327 67.53 6e-122 31 kDa ribonucleoprotein chloroplastic-like
blastp_kegg lcl|pop:POPTR_0001s35830g 1 318 + 318 Gaps:52 100.00 276 73.91 6e-121 POPTRDRAFT_1068992 hypothetical protein
blastp_kegg lcl|pxb:103959699 1 318 + 318 Gaps:38 95.65 299 73.78 8e-120 28 kDa ribonucleoprotein chloroplastic-like
blastp_kegg lcl|pxb:103960959 1 318 + 318 Gaps:43 95.58 294 75.44 6e-118 28 kDa ribonucleoprotein chloroplastic-like
blastp_pdb 2km8_C 126 312 + 187 Gaps:35 98.80 167 41.21 2e-19 mol:protein length:167 Nuclear polyadenylated RNA-binding protein 4
blastp_pdb 2cjk_A 126 312 + 187 Gaps:35 98.80 167 41.21 2e-19 mol:protein length:167 NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN 4
blastp_pdb 1ha1_A 126 302 + 177 Gaps:19 96.20 184 35.59 5e-19 mol:protein length:184 HNRNP A1
blastp_pdb 1up1_A 126 309 + 184 Gaps:16 96.70 182 36.36 5e-19 mol:protein length:182 HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1
blastp_pdb 2up1_A 126 302 + 177 Gaps:15 92.90 183 31.18 6e-19 mol:protein length:183 PROTEIN (HETEROGENEOUS NUCLEAR RIBONUCLEOPROT
blastp_pdb 1po6_A 126 302 + 177 Gaps:15 92.90 183 31.18 6e-19 mol:protein length:183 Heterogeneous nuclear ribonucleoprotein A1
blastp_pdb 1u1r_A 126 302 + 177 Gaps:19 90.31 196 35.59 6e-19 mol:protein length:196 Heterogeneous nuclear ribonucleoprotein A1
blastp_pdb 1u1q_A 126 302 + 177 Gaps:19 90.31 196 35.59 6e-19 mol:protein length:196 Heterogeneous nuclear ribonucleoprotein A1
blastp_pdb 1u1p_A 126 302 + 177 Gaps:19 90.31 196 35.59 6e-19 mol:protein length:196 Heterogeneous nuclear ribonucleoprotein A1
blastp_pdb 1u1o_A 126 302 + 177 Gaps:19 90.31 196 35.59 6e-19 mol:protein length:196 Heterogeneous nuclear ribonucleoprotein A1
blastp_uniprot_sprot sp|Q04836|ROC3_ARATH 34 316 + 283 Gaps:24 83.59 329 68.36 2e-104 31 kDa ribonucleoprotein chloroplastic OS Arabidopsis thaliana GN RBP31 PE 1 SV 1
blastp_uniprot_sprot sp|P19683|ROC4_NICSY 4 318 + 315 Gaps:43 94.60 315 65.10 1e-100 31 kDa ribonucleoprotein chloroplastic OS Nicotiana sylvestris PE 1 SV 1
blastp_uniprot_sprot sp|P28644|ROC1_SPIOL 60 315 + 256 Gaps:27 99.14 233 72.73 2e-98 28 kDa ribonucleoprotein chloroplastic OS Spinacia oleracea PE 1 SV 1
blastp_uniprot_sprot sp|P19682|ROC3_NICSY 5 318 + 314 Gaps:63 98.19 276 63.47 2e-97 28 kDa ribonucleoprotein chloroplastic OS Nicotiana sylvestris PE 1 SV 1
blastp_uniprot_sprot sp|Q08937|ROC2_NICSY 125 320 + 196 Gaps:39 72.51 291 55.92 6e-54 29 kDa ribonucleoprotein B chloroplastic OS Nicotiana sylvestris PE 1 SV 1
blastp_uniprot_sprot sp|P49314|ROC2_NICPL 125 320 + 196 Gaps:39 72.26 292 55.92 9e-54 31 kDa ribonucleoprotein chloroplastic OS Nicotiana plumbaginifolia PE 1 SV 1
blastp_uniprot_sprot sp|Q08935|ROC1_NICSY 130 318 + 189 Gaps:17 68.86 273 54.26 2e-51 29 kDa ribonucleoprotein A chloroplastic OS Nicotiana sylvestris PE 2 SV 1
blastp_uniprot_sprot sp|P49313|ROC1_NICPL 130 318 + 189 Gaps:35 69.53 279 52.58 5e-51 30 kDa ribonucleoprotein chloroplastic OS Nicotiana plumbaginifolia PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZUU4|ROC1_ARATH 127 315 + 189 Gaps:35 71.28 289 49.51 2e-50 Ribonucleoprotein At2g37220 chloroplastic OS Arabidopsis thaliana GN At2g37220 PE 1 SV 1
blastp_uniprot_sprot sp|P19684|ROC5_NICSY 131 316 + 186 Gaps:24 56.48 324 48.63 8e-37 33 kDa ribonucleoprotein chloroplastic OS Nicotiana sylvestris PE 1 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 126 228 103 SSF54928 none none none
Gene3D 104 211 108 G3DSA:3.30.70.330 none none IPR012677
ProSiteProfiles 233 311 79 PS50102 none Eukaryotic RNA Recognition Motif (RRM) profile. IPR000504
Gene3D 212 316 105 G3DSA:3.30.70.330 none none IPR012677
PANTHER 73 314 242 PTHR24012 none none none
SMART 132 214 83 SM00360 none RNA recognition motif IPR000504
SMART 234 307 74 SM00360 none RNA recognition motif IPR000504
PANTHER 73 314 242 PTHR24012:SF161 none none none
SUPERFAMILY 228 316 89 SSF54928 none none none
Pfam 235 304 70 PF00076 none RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) IPR000504
Pfam 133 190 58 PF00076 none RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) IPR000504
ProSiteProfiles 131 218 88 PS50102 none Eukaryotic RNA Recognition Motif (RRM) profile. IPR000504

0 Localization

0 Qtllist

0 Targeting