Protein : Qrob_P0045480.2 Q. robur
Protein Identifier  ? Qrob_P0045480.2 Organism . Name  Quercus robur
Score  49.0 Score Type  egn
Protein Description  (M=1) KOG1488//KOG2049//KOG2188 - Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily) [Translation ribosomal structure and biogenesis]. // Translational repressor MPT5/PUF4 and related RNA-binding proteins (Puf superfamily) [Translation ribosomal structure and biogenesis]. // Predicted RNA-binding protein contains Pumilio domains [Translation ribosomal structure and biogenesis]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 435  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0003723 RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_034750 92 430 + 339 Gaps:5 62.22 540 57.74 8e-128 Pumilio domain-containing protein C4G8.03c putative isoform 1
blastp_kegg lcl|cit:102614027 96 424 + 329 Gaps:16 70.68 474 64.48 9e-128 pumilio homolog 12-like
blastp_kegg lcl|pper:PRUPE_ppa024026mg 64 426 + 363 Gaps:23 82.83 466 52.07 3e-124 hypothetical protein
blastp_kegg lcl|pmum:103320392 64 426 + 363 Gaps:13 78.66 478 52.39 3e-124 pumilio homolog 12-like
blastp_kegg lcl|vvi:100854713 67 424 + 358 Gaps:18 65.51 574 52.66 4e-119 putative pumilio homolog 7 chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10003448mg 96 422 + 327 Gaps:15 65.25 469 64.71 4e-115 hypothetical protein
blastp_kegg lcl|pop:POPTR_0014s02050g 105 427 + 323 Gaps:1 63.65 509 52.78 3e-111 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_009G069800g 68 424 + 357 Gaps:3 72.62 493 47.77 1e-107 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1588230 106 425 + 320 Gaps:9 60.70 542 51.37 2e-106 RNA binding protein putative
blastp_kegg lcl|mdm:103441072 66 420 + 355 Gaps:11 72.77 481 53.14 8e-105 pumilio homolog 12-like
blastp_pdb 4dzs_B 111 419 + 309 Gaps:21 88.52 357 33.86 1e-45 mol:protein length:357 Pumilio homology domain family member 4
blastp_pdb 4dzs_A 111 419 + 309 Gaps:21 88.52 357 33.86 1e-45 mol:protein length:357 Pumilio homology domain family member 4
blastp_pdb 3bwt_A 111 419 + 309 Gaps:21 94.89 333 33.86 1e-45 mol:protein length:333 Protein PUF4
blastp_pdb 3bx2_B 111 419 + 309 Gaps:21 94.33 335 33.86 1e-45 mol:protein length:335 Protein PUF4
blastp_pdb 3bx2_A 111 419 + 309 Gaps:21 94.33 335 33.86 1e-45 mol:protein length:335 Protein PUF4
blastp_pdb 3bx3_B 111 419 + 309 Gaps:21 94.33 335 33.54 2e-43 mol:protein length:335 Protein PUF4
blastp_pdb 3bx3_A 111 419 + 309 Gaps:21 94.33 335 33.54 2e-43 mol:protein length:335 Protein PUF4
blastp_pdb 3q0p_B 89 424 + 336 Gaps:32 96.28 349 38.69 4e-41 mol:protein length:349 Pumilio homolog 1
blastp_pdb 3q0p_A 89 424 + 336 Gaps:32 96.28 349 38.69 4e-41 mol:protein length:349 Pumilio homolog 1
blastp_pdb 3q0o_B 89 424 + 336 Gaps:32 96.28 349 38.69 4e-41 mol:protein length:349 Pumilio homolog 1
blastp_uniprot_sprot sp|Q9C9R6|PUM7_ARATH 108 420 + 313 Gaps:3 48.00 650 43.27 7e-77 Putative pumilio homolog 7 chloroplastic OS Arabidopsis thaliana GN APUM7 PE 3 SV 2
blastp_uniprot_sprot sp|Q9LM20|PUM8_ARATH 106 420 + 315 Gaps:3 60.97 515 42.04 1e-76 Putative pumilio homolog 8 chloroplastic OS Arabidopsis thaliana GN APUM8 PE 3 SV 2
blastp_uniprot_sprot sp|Q9LVC3|PUM12_ARATH 34 420 + 387 Gaps:42 69.97 596 35.49 4e-73 Pumilio homolog 12 OS Arabidopsis thaliana GN APUM12 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LDW3|PUM11_ARATH 98 403 + 306 Gaps:4 54.68 556 43.09 4e-70 Pumilio homolog 11 OS Arabidopsis thaliana GN APUM11 PE 3 SV 2
blastp_uniprot_sprot sp|Q1PFN9|PUM9_ARATH 98 420 + 323 Gaps:7 56.74 564 41.56 8e-67 Pumilio homolog 9 OS Arabidopsis thaliana GN APUM9 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LP21|PUM10_ARATH 101 420 + 320 Gaps:5 60.04 528 39.12 7e-59 Putative pumilio homolog 10 OS Arabidopsis thaliana GN APUM10 PE 3 SV 2
blastp_uniprot_sprot sp|Q92359|YDHE_SCHPO 113 420 + 308 Gaps:2 44.93 681 36.60 1e-54 Pumilio domain-containing protein C6G9.14 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC6G9.14 PE 4 SV 1
blastp_uniprot_sprot sp|Q09829|YAD3_SCHPO 111 419 + 309 Gaps:2 39.36 780 34.85 2e-51 Pumilio domain-containing protein C4G8.03c OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC4G8.03c PE 4 SV 1
blastp_uniprot_sprot sp|Q9FMH4|PUM13_ARATH 105 419 + 315 Gaps:9 60.34 527 35.53 3e-48 Putative pumilio homolog 13 OS Arabidopsis thaliana GN APUM13 PE 3 SV 1
blastp_uniprot_sprot sp|O81465|PUM15_ARATH 109 391 + 283 Gaps:14 61.01 477 37.46 8e-48 Pumilio homolog 15 OS Arabidopsis thaliana GN APUM15 PE 3 SV 1

23 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 327 362 36 PS50302 none Pumilio RNA-binding repeat profile. IPR001313
ProSiteProfiles 255 290 36 PS50302 none Pumilio RNA-binding repeat profile. IPR001313
PANTHER 60 419 360 PTHR12537 none none none
ProSiteProfiles 108 143 36 PS50302 none Pumilio RNA-binding repeat profile. IPR001313
ProSiteProfiles 363 400 38 PS50302 none Pumilio RNA-binding repeat profile. IPR001313
ProSiteProfiles 180 218 39 PS50302 none Pumilio RNA-binding repeat profile. IPR001313
ProSiteProfiles 291 326 36 PS50302 none Pumilio RNA-binding repeat profile. IPR001313
SUPERFAMILY 99 423 325 SSF48371 none none IPR016024
ProSiteProfiles 144 179 36 PS50302 none Pumilio RNA-binding repeat profile. IPR001313
ProSiteProfiles 219 254 36 PS50302 none Pumilio RNA-binding repeat profile. IPR001313
Pfam 145 178 34 PF00806 none Pumilio-family RNA binding repeat IPR001313
Pfam 292 324 33 PF00806 none Pumilio-family RNA binding repeat IPR001313
Pfam 258 286 29 PF00806 none Pumilio-family RNA binding repeat IPR001313
ProSiteProfiles 88 426 339 PS50303 none Pumilio homology domain (PUM-HD) profile. IPR001313
SMART 327 363 37 SM00025 none Pumilio-like repeats IPR001313
SMART 365 400 36 SM00025 none Pumilio-like repeats IPR001313
SMART 219 254 36 SM00025 none Pumilio-like repeats IPR001313
SMART 291 326 36 SM00025 none Pumilio-like repeats IPR001313
SMART 108 143 36 SM00025 none Pumilio-like repeats IPR001313
SMART 182 217 36 SM00025 none Pumilio-like repeats IPR001313
SMART 144 179 36 SM00025 none Pumilio-like repeats IPR001313
SMART 255 290 36 SM00025 none Pumilio-like repeats IPR001313
Gene3D 102 426 325 G3DSA:1.25.10.10 none none IPR011989

0 Localization

0 Qtllist

0 Targeting