Protein : Qrob_P0045370.2 Q. robur
Protein Identifier  ? Qrob_P0045370.2 Organism . Name  Quercus robur
Score  89.0 Score Type  egn
Protein Description  (M=1) PF02041 - Auxin binding protein Gene Prediction Quality  validated
Protein length 

Sequence

Length: 229  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0004872 receptor activity Combining with an extracellular or intracellular messenger to initiate a change in cell activity.

25 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10022400mg 13 228 + 216 Gaps:31 100.00 191 80.10 1e-104 hypothetical protein
blastp_kegg lcl|cit:102608050 13 228 + 216 Gaps:31 100.00 191 80.10 1e-104 auxin-binding protein T92-like
blastp_kegg lcl|vvi:100233074 29 228 + 200 Gaps:28 91.49 188 85.47 3e-101 ABP1 auxin-binding protein 1
blastp_kegg lcl|pop:POPTR_0002s22920g 33 228 + 196 Gaps:28 86.60 194 85.12 3e-99 hypothetical protein
blastp_kegg lcl|pxb:103947537 29 228 + 200 Gaps:30 90.62 192 82.76 2e-97 auxin-binding protein T85
blastp_kegg lcl|cmo:103492707 13 228 + 216 Gaps:29 100.00 189 78.84 2e-97 6D05 auxin-binding protein T85
blastp_kegg lcl|rcu:RCOM_0647760 21 228 + 208 Gaps:36 97.92 192 78.19 1e-96 Auxin-binding protein T85 precursor putative (EC:1.3.1.74)
blastp_kegg lcl|pmum:103333812 13 228 + 216 Gaps:31 100.00 191 76.96 1e-96 auxin-binding protein T85
blastp_kegg lcl|gmx:100801817 9 228 + 220 Gaps:30 99.48 191 74.74 6e-96 auxin-binding protein T85-like
blastp_kegg lcl|csv:101218012 13 228 + 216 Gaps:29 100.00 189 78.31 7e-96 auxin-binding protein T85-like
blastp_pdb 1lrh_D 38 222 + 185 Gaps:29 95.71 163 69.23 1e-72 mol:protein length:163 auxin-binding protein 1
blastp_pdb 1lrh_C 38 222 + 185 Gaps:29 95.71 163 69.23 1e-72 mol:protein length:163 auxin-binding protein 1
blastp_pdb 1lrh_B 38 222 + 185 Gaps:29 95.71 163 69.23 1e-72 mol:protein length:163 auxin-binding protein 1
blastp_pdb 1lrh_A 38 222 + 185 Gaps:29 95.71 163 69.23 1e-72 mol:protein length:163 auxin-binding protein 1
blastp_pdb 1lr5_D 38 222 + 185 Gaps:29 95.71 163 69.23 1e-72 mol:protein length:163 Auxin binding protein 1
blastp_pdb 1lr5_C 38 222 + 185 Gaps:29 95.71 163 69.23 1e-72 mol:protein length:163 Auxin binding protein 1
blastp_pdb 1lr5_B 38 222 + 185 Gaps:29 95.71 163 69.23 1e-72 mol:protein length:163 Auxin binding protein 1
blastp_pdb 1lr5_A 38 222 + 185 Gaps:29 95.71 163 69.23 1e-72 mol:protein length:163 Auxin binding protein 1
blastp_uniprot_sprot sp|P33490|ABP1_TOBAC 29 228 + 200 Gaps:29 92.51 187 79.77 1e-95 Auxin-binding protein T85 OS Nicotiana tabacum GN T85 PE 3 SV 1
blastp_uniprot_sprot sp|P33491|ABP2_TOBAC 29 228 + 200 Gaps:29 92.51 187 78.03 7e-94 Auxin-binding protein T92 OS Nicotiana tabacum GN T92 PE 3 SV 1
blastp_uniprot_sprot sp|P33487|ABP1_ARATH 4 228 + 225 Gaps:35 95.96 198 72.63 1e-88 Auxin-binding protein 1 OS Arabidopsis thaliana GN ERABP1 PE 1 SV 1
blastp_uniprot_sprot sp|P33488|ABP4_MAIZE 43 228 + 186 Gaps:30 76.47 204 75.00 2e-76 Auxin-binding protein 4 OS Zea mays GN ABP4 PE 2 SV 1
blastp_uniprot_sprot sp|P13689|ABP1_MAIZE 24 228 + 205 Gaps:30 87.06 201 65.71 7e-74 Auxin-binding protein 1 OS Zea mays GN ABP1 PE 1 SV 1
blastp_uniprot_sprot sp|P33489|ABP5_MAIZE 43 143 + 101 Gaps:1 66.67 150 71.00 8e-45 Auxin-binding protein 5 (Fragment) OS Zea mays GN ABP5 PE 3 SV 1
rpsblast_cdd gnl|CDD|110987 36 228 + 193 Gaps:29 100.00 164 86.59 2e-86 pfam02041 Auxin_BP Auxin binding protein.

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 165 216 52 SSF51182 none none IPR011051
Phobius 34 228 195 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 33 33 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 17 28 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 171 223 53 G3DSA:2.60.120.10 none none IPR014710
Gene3D 41 143 103 G3DSA:2.60.120.10 none none IPR014710
SUPERFAMILY 41 147 107 SSF51182 none none IPR011051
Phobius 29 33 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 16 16 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PRINTS 116 129 14 PR00655 none Auxin binding protein signature IPR000526
PRINTS 129 144 16 PR00655 none Auxin binding protein signature IPR000526
PRINTS 85 109 25 PR00655 none Auxin binding protein signature IPR000526
PRINTS 42 61 20 PR00655 none Auxin binding protein signature IPR000526
PRINTS 62 82 21 PR00655 none Auxin binding protein signature IPR000526
Pfam 33 144 112 PF02041 none Auxin binding protein IPR000526
Pfam 166 228 63 PF02041 none Auxin binding protein IPR000526

2 Localization

Analysis Start End Length
SignalP_EUK 1 33 32
TMHMM 13 35 22

0 Qtllist

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 33   Secretory pathway 3 0.692 0.093 NON-PLANT 33